RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ACADSBP45954 432 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 DLGAP5Q15398 846 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 ZFYVE27Q5T4F4 411 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 SNRNP48Q6IEG0 339 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 MIGA2Q7L4E1 593 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 SFR1Q86XK3 245 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 DDHD1Q8NEL9 900 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 DENND2DQ9H6A0 471 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 ZNF277Q9NRM2 450 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 FKBP14Q9NWM8 211 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 KLHL14Q9P2G3 628 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 STX18Q9P2W9 335 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 GTF3C4Q9UKN8 822 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 BHMG1C9JSJ3 638 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 RNF225M0QZC1 329 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 ECHS1P30084 290 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 PHBP35232 272 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 LONP1P36776 959 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 GRM2Q14416 872 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 HLTFQ14527 1009 aaKnown RBP eCLIP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 ANKDD1AQ495B1 522 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 TMEM214Q6NUQ4 689 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 PPP1R18Q6NYC8 613 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 UBLCP1Q8WVY7 318 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 EPSTI1Q96J88 318 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 COX4I2Q96KJ9 171 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 PRMT6Q96LA8 375 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 CEP295NLQ96MC4 621 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 PRMT1Q99873 361 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 STK33Q9BYT3 514 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 STMN4Q9H169 189 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 ADAM7Q9H2U9 754 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 CPVLQ9H3G5 476 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 DNAJC18Q9H819 358 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 SERTAD1Q9UHV2 236 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 PNMA2Q9UL42 364 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 ZNRF3Q9ULT6 936 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 CD2APQ9Y5K6 639 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 PNMA6FA0A0J9YX94 578 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 ZSCAN5CA6NGD5 496 aaPredicted RBP13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 NDC80O14777 642 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 KMOO15229 486 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 SLC26A4O43511 780 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 RAD17O75943 681 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 ORC2Q13416 577 aaPredicted RBP13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 NR1D2Q14995 579 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 NONOQ15233 471 aaKnown RBP eCLIP13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 PCNX4Q63HM2 1172 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 NFRKBQ6P4R8 1299 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 C1orf228Q6PIY5 440 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 ACAD11Q709F0 780 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 SH3BP5LQ7L8J4 393 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 MCF2L2Q86YR7 1114 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 AGBL3Q8NEM8 1001 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 RASGRP4Q8TDF6 673 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 DCAF4Q8WV16 495 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 NRG4Q8WWG1 115 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 SYMPKQ92797 1274 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 GRAMD1AQ96CP6 724 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 HSPBAP1Q96EW2 488 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 DNAJC1Q96KC8 554 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 KLHL4Q9C0H6 718 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 SH2D4AQ9H788 454 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 CAPN11Q9UMQ6 739 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 A0A1W2PQC6 194 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 MACROD2A1Z1Q3 448 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 ADAM23O75077 832 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 BDNFP23560 247 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 MARK3P27448 753 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 GPC3P51654 580 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 RASSF7Q02833 373 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 ABCB5Q2M3G0 1257 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 DALRD3Q5D0E6 543 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 WDR45BQ5MNZ6 344 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 REXO1Q8N1G1 1221 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 GOLM1Q8NBJ4 401 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 CDK5RAP3Q96JB5 506 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 MAELQ96JY0 434 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 CSRNP1Q96S65 589 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 GMLQ99445 158 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 DDX50Q9BQ39 737 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 SELENOSQ9BQE4 189 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 FBXL5Q9UKA1 691 aa13.41□□□□□ -0.26
RTFDC1-207ENST00000477573 SIPA1L1O43166 1804 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 RCCD1A6NED2 376 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 AGTP01019 485 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 SEPT6Q14141 434 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 CTC1Q2NKJ3 1217 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 WDR59Q6PJI9 974 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 DTHD1Q6ZMT9 781 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 CLEC10AQ8IUN9 316 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 RHOT2Q8IXI1 618 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 TTC8Q8TAM2 541 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 GIPC2Q8TF65 315 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 DYDC2Q96IM9 177 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 TBC1D10AQ9BXI6 508 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms