RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 MAN1C1Q9NR34 630 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 KCNG1Q9UIX4 513 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 STYXL1Q9Y6J8 313 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 DOCK6Q96HP0 2047 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 CARNS1A5YM72 827 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 TGM5O43548 720 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 ACTN4O43707 911 aaKnown RBP19.22■□□□□ 0.67
PTPN7-209ENST00000477554 NFICP08651 508 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 CLTAP09496 248 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 PFKFB1P16118 471 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 CMA1P23946 247 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 ZBTB6Q15916 424 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 L1TD1Q5T7N2 865 aaKnown RBP19.22■□□□□ 0.67
PTPN7-209ENST00000477554 SAAL1Q96ER3 474 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 KIF12Q96FN5 646 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 RPGRIP1Q96KN7 1286 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 TTPALQ9BTX7 342 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 GOLPH3LQ9H4A5 285 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 OLFML3Q9NRN5 406 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 KCNH3Q9ULD8 1083 aa19.22■□□□□ 0.67
PTPN7-209ENST00000477554 TMEM189-UBE2V1I3L0A0 370 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 GADD45BO75293 160 aaPredicted RBP19.21■□□□□ 0.67
PTPN7-209ENST00000477554 GAP43P17677 238 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 FGFR3P22607 806 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 ASIC1P78348 528 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 CBX2Q14781 532 aaPredicted RBP19.21■□□□□ 0.67
PTPN7-209ENST00000477554 JADE1Q6IE81 842 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 DCLRE1AQ6PJP8 1040 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 IQUBQ8NA54 791 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 DDX27Q96GQ7 796 aaKnown RBP19.21■□□□□ 0.67
PTPN7-209ENST00000477554 C7orf25Q9BPX7 421 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 CBWD1Q9BRT8 395 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 ADAM7Q9H2U9 754 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 C11orf16Q9NQ32 467 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 SEL1LQ9UBV2 794 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 DENND4AQ7Z401 1863 aa19.21■□□□□ 0.67
PTPN7-209ENST00000477554 MTCL1Q9Y4B5 1905 aaKnown RBP19.21■□□□□ 0.67
PTPN7-209ENST00000477554 GOLGA8IPA6NC78 632 aa19.2■□□□□ 0.66
PTPN7-209ENST00000477554 FAM86C2PA6NEL3 165 aa19.2■□□□□ 0.66
PTPN7-209ENST00000477554 GOLGA8JA6NMD2 632 aa19.2■□□□□ 0.66
PTPN7-209ENST00000477554 ADRB2P07550 413 aa19.2■□□□□ 0.66
PTPN7-209ENST00000477554 EHHADHQ08426 723 aa19.2■□□□□ 0.66
PTPN7-209ENST00000477554 BMS1Q14692 1282 aaKnown RBP19.2■□□□□ 0.66
PTPN7-209ENST00000477554 PSMD5Q16401 504 aa19.2■□□□□ 0.66
PTPN7-209ENST00000477554 LILRA6Q6PI73 481 aa19.2■□□□□ 0.66
PTPN7-209ENST00000477554 PCIF1Q9H4Z3 704 aa19.2■□□□□ 0.66
PTPN7-209ENST00000477554 RPF1Q9H9Y2 349 aaKnown RBP19.2■□□□□ 0.66
PTPN7-209ENST00000477554 FAM13BQ9NYF5 915 aa19.2■□□□□ 0.66
PTPN7-209ENST00000477554 AGO2Q9UKV8 859 aaKnown RBP19.2■□□□□ 0.66
PTPN7-209ENST00000477554 HPSEQ9Y251 543 aa19.2■□□□□ 0.66
PTPN7-209ENST00000477554 LOC730098B7Z3J9 87 aa19.19■□□□□ 0.66
PTPN7-209ENST00000477554 KLRC4O43908 158 aa19.19■□□□□ 0.66
PTPN7-209ENST00000477554 PRR29P0C7W0 189 aa19.19■□□□□ 0.66
PTPN7-209ENST00000477554 NDUFA8P51970 172 aa19.19■□□□□ 0.66
PTPN7-209ENST00000477554 EFCAB13Q8IY85 973 aa19.19■□□□□ 0.66
PTPN7-209ENST00000477554 PIK3R5Q8WYR1 880 aa19.19■□□□□ 0.66
PTPN7-209ENST00000477554 POMGNT1Q8WZA1 660 aa19.19■□□□□ 0.66
PTPN7-209ENST00000477554 ACCSQ96QU6 501 aa19.19■□□□□ 0.66
PTPN7-209ENST00000477554 PHF7Q9BWX1 381 aaPredicted RBP19.19■□□□□ 0.66
PTPN7-209ENST00000477554 PRKAG3Q9UGI9 489 aa19.19■□□□□ 0.66
PTPN7-209ENST00000477554 MUTYHQ9UIF7 546 aa19.19■□□□□ 0.66
PTPN7-209ENST00000477554 SCN1AP35498 2009 aa19.19■□□□□ 0.66
PTPN7-209ENST00000477554 MBD3O95983 291 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 GLUD1P00367 558 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 ADH1AP07327 375 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 SRGAP2BP0DMP2 458 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 HOXB8P17481 243 aaPredicted RBP19.18■□□□□ 0.66
PTPN7-209ENST00000477554 PPP2R3AQ06190 1150 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 EPM2AIP1Q7L775 607 aaPredicted RBP19.18■□□□□ 0.66
PTPN7-209ENST00000477554 CCDC65Q8IXS2 484 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 FSIP1Q8NA03 581 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 ZNF707Q96C28 371 aaPredicted RBP19.18■□□□□ 0.66
PTPN7-209ENST00000477554 PAGE5Q96GU1 130 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 UROC1Q96N76 676 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 FAM213AQ9BRX8 229 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 CUEDC2Q9H467 287 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 SLC38A7Q9NVC3 462 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 FNIP2Q9P278 1114 aa19.18■□□□□ 0.66
PTPN7-209ENST00000477554 TIMM13Q9Y5L4 95 aaPredicted RBP19.18■□□□□ 0.66
PTPN7-209ENST00000477554 SPTLC1O15269 473 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 CDR1P51861 262 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 CNNM4Q6P4Q7 775 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.17■□□□□ 0.66
PTPN7-209ENST00000477554 RNF135Q8IUD6 432 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 HVCN1Q96D96 273 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 PLEKHA5Q9HAU0 1116 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 SLC39A2Q9NP94 309 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 DZANK1Q9NVP4 752 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 STK39Q9UEW8 545 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 FAM50BQ9Y247 325 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 CCDC195A0A1B0GUA6 201 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 FSD2A1L4K1 749 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 C2CD4DB7Z1M9 353 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 TULP1O00294 542 aaPredicted RBP19.17■□□□□ 0.66
PTPN7-209ENST00000477554 OR1D2P34982 312 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 TSC2P49815 1807 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 SKOR2Q2VWA4 1001 aaPredicted RBP19.17■□□□□ 0.66
PTPN7-209ENST00000477554 VARS2Q5ST30 1063 aaKnown RBP19.17■□□□□ 0.66
PTPN7-209ENST00000477554 PPFIBP1Q86W92 1011 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 NELFCDQ8IXH7 590 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms