RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ZC3H11AO75152 810 aaKnown RBP eCLIP16.59■□□□□ 0.25
SEC13-215ENST00000477547 CAVIN2O95810 425 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 GNA14O95837 355 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 TMEM191BP0C7N4 346 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 TRIM49P0CI25 452 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 TRIM49CP0CI26 452 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 TFAMQ00059 246 aaKnown RBP16.59■□□□□ 0.25
SEC13-215ENST00000477547 TFF2Q03403 129 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 TUSC3Q13454 348 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 RAB30Q15771 203 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 HSP90AA4PQ58FG1 418 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 SPOUT1Q5T280 376 aaKnown RBP16.59■□□□□ 0.25
SEC13-215ENST00000477547 FILIP1Q7Z7B0 1213 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 WDR49Q8IV35 697 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 MICALL1Q8N3F8 863 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 FIBCD1Q8N539 461 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 PLEKHO2Q8TD55 490 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 FAM84AQ96KN4 292 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 FAM193BQ96PV7 902 aaPredicted RBP16.59■□□□□ 0.25
SEC13-215ENST00000477547 C1QTNF1Q9BXJ1 281 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 MTMR12Q9C0I1 747 aa16.59■□□□□ 0.25
SEC13-215ENST00000477547 ARMCX3Q9UH62 379 aaPredicted RBP16.59■□□□□ 0.25
SEC13-215ENST00000477547 UBQLN1Q9UMX0 589 aaKnown RBP16.59■□□□□ 0.25
SEC13-215ENST00000477547 VWA8A3KMH1 1905 aa16.58■□□□□ 0.25
SEC13-215ENST00000477547 CASTOR2A6NHX0 329 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 CA3P07451 260 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 BMP1P13497 986 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 MYOGP15173 224 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 TNNI1P19237 187 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 VAMP7P51809 220 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 SOX4Q06945 474 aaPredicted RBP16.58■□□□□ 0.24
SEC13-215ENST00000477547 DSC1Q08554 894 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 NAB2Q15742 525 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 TCERG1LQ5VWI1 586 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 FRMD5Q7Z6J6 570 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 NT5DC4Q86YG4 428 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 DHX40Q8IX18 779 aaKnown RBP16.58■□□□□ 0.24
SEC13-215ENST00000477547 BEST2Q8NFU1 509 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 FAM200AQ8TCP9 573 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 TMC2Q8TDI7 906 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 PARD3BQ8TEW8 1205 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 C18orf25Q96B23 403 aaPredicted RBP16.58■□□□□ 0.24
SEC13-215ENST00000477547 TSPAN18Q96SJ8 248 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 GOLGA2P5Q9HBQ8 144 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 CBX8Q9HC52 389 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 METTL14Q9HCE5 456 aaKnown RBP16.58■□□□□ 0.24
SEC13-215ENST00000477547 MAGEC2Q9UBF1 373 aaPredicted RBP16.58■□□□□ 0.24
SEC13-215ENST00000477547 CACNG4Q9UBN1 327 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 DNAJB4Q9UDY4 337 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 MSRAQ9UJ68 235 aa16.58■□□□□ 0.24
SEC13-215ENST00000477547 YBX2Q9Y2T7 364 aaKnown RBP16.58■□□□□ 0.24
SEC13-215ENST00000477547 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.58■□□□□ 0.24
SEC13-215ENST00000477547 BECN2A8MW95 431 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 IKBKBO14920 756 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 DDHD2O94830 711 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 TNNC2P02585 160 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 LAG3P18627 525 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 KCNQ1P51787 676 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 GUCY2FP51841 1108 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 MARSP56192 900 aaKnown RBP16.57■□□□□ 0.24
SEC13-215ENST00000477547 DLG4P78352 724 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 ENPEPQ07075 957 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 NCAPHQ15003 741 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 ZNF280BQ86YH2 543 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 CREBRFQ8IUR6 639 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 OR5B17Q8NGF7 314 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 BORCS6Q96GS4 357 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 ANKRD36BP1Q96IX9 119 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 EPHX3Q9H6B9 360 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 CWH43Q9H720 699 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 NRDE2Q9H7Z3 1164 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 MMRN2Q9H8L6 949 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 SAMSN1Q9NSI8 373 aaKnown RBP16.57■□□□□ 0.24
SEC13-215ENST00000477547 INTS13Q9NVM9 706 aa16.57■□□□□ 0.24
SEC13-215ENST00000477547 LINC01553A4QN01 128 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 SMTNL1A8MU46 457 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 KCNJ18B7U540 433 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 PBX3P40426 434 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 MTIF2P46199 727 aaKnown RBP16.56■□□□□ 0.24
SEC13-215ENST00000477547 KCNJ12Q14500 433 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 CDKAL1Q5VV42 579 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 LUZP1Q86V48 1076 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 TRIM59Q8IWR1 403 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 COLGALT2Q8IYK4 626 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 TMEM130Q8N3G9 435 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 CACTINQ8WUQ7 758 aaKnown RBP16.56■□□□□ 0.24
SEC13-215ENST00000477547 POP1Q99575 1024 aaKnown RBP16.56■□□□□ 0.24
SEC13-215ENST00000477547 LRFN3Q9BTN0 628 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 FANCLQ9NW38 375 aa16.56■□□□□ 0.24
SEC13-215ENST00000477547 PRG3Q9Y2Y8 225 aaPredicted RBP16.56■□□□□ 0.24
SEC13-215ENST00000477547 ARHGEF15O94989 841 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 CYP3A5P20815 502 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 EEF1GP26641 437 aaKnown RBP16.55■□□□□ 0.24
SEC13-215ENST00000477547 CTNNB1P35222 781 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 OR1G1P47890 313 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 SLC11A1P49279 550 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 BIRC3Q13489 604 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 IQCB1Q15051 598 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 ZBTB6Q15916 424 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 C1orf220Q5T0J3 134 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms