RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 CBWD6Q4V339 395 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 CBWD3Q5JTY5 395 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 CBWD5Q5RIA9 395 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 KRT39Q6A163 491 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 SV2AQ7L0J3 742 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 HERC6Q8IVU3 1022 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 LRRC43Q8N309 656 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 ZNF689Q96CS4 500 aaPredicted RBP17.49■□□□□ 0.39
VHL-203ENST00000477538 YME1L1Q96TA2 773 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 ZBED2Q9BTP6 218 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 DPP3Q9NY33 737 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.49■□□□□ 0.39
VHL-203ENST00000477538 VWA8A3KMH1 1905 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 PLXNA4Q9HCM2 1894 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 C4BPAP04003 597 aaKnown RBP17.48■□□□□ 0.39
VHL-203ENST00000477538 CYP3A5P20815 502 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 GUCY2FP51841 1108 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 PLCB2Q00722 1185 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 TUSC3Q13454 348 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 ZACNQ401N2 412 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 FILIP1LQ4L180 1135 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 TDRD10Q5VZ19 366 aaKnown RBP17.48■□□□□ 0.39
VHL-203ENST00000477538 C15orf39Q6ZRI6 1047 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 TRAPPC11Q7Z392 1133 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 CMTR2Q8IYT2 770 aaKnown RBP17.48■□□□□ 0.39
VHL-203ENST00000477538 TMEM130Q8N3G9 435 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 C1orf127Q8N9H9 656 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 FAM193BQ96PV7 902 aaPredicted RBP17.48■□□□□ 0.39
VHL-203ENST00000477538 GOLGA2P5Q9HBQ8 144 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 ITGA11Q9UKX5 1188 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 TSC2P49815 1807 aa17.48■□□□□ 0.39
VHL-203ENST00000477538 GOLGA6L3A6NEY3 463 aa17.47■□□□□ 0.39
VHL-203ENST00000477538 LGALS16A8MUM7 142 aa17.47■□□□□ 0.39
VHL-203ENST00000477538 PHACTR2O75167 634 aa17.47■□□□□ 0.39
VHL-203ENST00000477538 ITGB3P05106 788 aa17.47■□□□□ 0.39
VHL-203ENST00000477538 BMP8BP34820 402 aa17.47■□□□□ 0.39
VHL-203ENST00000477538 UBASH3AP57075 661 aa17.47■□□□□ 0.39
VHL-203ENST00000477538 HTRA4P83105 476 aaPredicted RBP17.47■□□□□ 0.39
VHL-203ENST00000477538 DSC1Q08554 894 aa17.47■□□□□ 0.39
VHL-203ENST00000477538 BTG3Q14201 252 aaPredicted RBP17.47■□□□□ 0.39
VHL-203ENST00000477538 ZNF280BQ86YH2 543 aa17.47■□□□□ 0.39
VHL-203ENST00000477538 IFNKQ9P0W0 207 aa17.47■□□□□ 0.39
VHL-203ENST00000477538 INSL6Q9Y581 213 aa17.47■□□□□ 0.39
VHL-203ENST00000477538 A0A1B0GTH6 734 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 FSD2A1L4K1 749 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 CASTOR2A6NHX0 329 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 PMM2O15305 246 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 P4HA2O15460 535 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 B4GALT3O60512 393 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 DDHD2O94830 711 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 KRT19P08727 400 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 LRPAP1P30533 357 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 PIK3CAP42336 1068 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 FKBP15Q5T1M5 1219 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 UROC1Q96N76 676 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 NAP1L5Q96NT1 182 aaPredicted RBP17.46■□□□□ 0.39
VHL-203ENST00000477538 RAD9AQ99638 391 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 NRDE2Q9H7Z3 1164 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 RTN4Q9NQC3 1192 aaKnown RBP17.46■□□□□ 0.39
VHL-203ENST00000477538 HCSTQ9UBK5 93 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 CACNG4Q9UBN1 327 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 SIX4Q9UIU6 781 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 MYO9BQ13459 2157 aa17.46■□□□□ 0.39
VHL-203ENST00000477538 GTPBP10A4D1E9 387 aaKnown RBP17.45■□□□□ 0.38
VHL-203ENST00000477538 TLL1O43897 1013 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 ZC3H11AO75152 810 aaKnown RBP eCLIP17.45■□□□□ 0.38
VHL-203ENST00000477538 VNN1O95497 513 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 HLA-DRAP01903 254 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 POLR2BP30876 1174 aaKnown RBP17.45■□□□□ 0.38
VHL-203ENST00000477538 RBP5P82980 135 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 UBXN1Q04323 297 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 CETN1Q12798 172 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 TRPC3Q13507 836 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 NCOA4Q13772 614 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 EPC2Q52LR7 807 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 C9orf57Q5W0N0 161 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 SARM1Q6SZW1 724 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 COLGALT2Q8IYK4 626 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 FBXL13Q8NEE6 735 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 CXorf38Q8TB03 319 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 TAS1R2Q8TE23 839 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 DNAJB4Q9UDY4 337 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 AGAP1Q9UPQ3 857 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 COQ4Q9Y3A0 265 aa17.45■□□□□ 0.38
VHL-203ENST00000477538 R3HCC1Q9Y3T6 440 aaKnown RBP17.45■□□□□ 0.38
VHL-203ENST00000477538 ANO9A1A5B4 782 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 PODXLO00592 558 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 PPEF2O14830 753 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 TEX33O43247 280 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 AP5Z1O43299 807 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 CBFA2T2O43439 604 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 CST3P01034 146 aaPredicted RBP17.44■□□□□ 0.38
VHL-203ENST00000477538 RPL9P32969 192 aaKnown RBP17.44■□□□□ 0.38
VHL-203ENST00000477538 CLCNKBP51801 687 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 GSE1Q14687 1217 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 NR1I3Q14994 352 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 SCARA3Q6AZY7 606 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 GBP6Q6ZN66 633 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 FIBCD1Q8N539 461 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 DDX27Q96GQ7 796 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms