RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 LEXMQ3ZCV2 418 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 TJAP1Q5JTD0 557 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 CRELD2Q6UXH1 353 aaPredicted RBP16.33■□□□□ 0.2
DFFA-203ENST00000476658 HS2ST1Q7LGA3 356 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 KIAA0895Q8NCT3 520 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 C3orf58Q8NDZ4 430 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 ZSWIM2Q8NEG5 633 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 ENGASEQ8NFI3 743 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 VN1R2Q8NFZ6 395 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 RIN2Q8WYP3 895 aaPredicted RBP16.33■□□□□ 0.2
DFFA-203ENST00000476658 TSPAN18Q96SJ8 248 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 ASB7Q9H672 318 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 CHST7Q9NS84 486 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 NUB1Q9Y5A7 615 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 SPTBN5Q9NRC6 3674 aaKnown RBP16.33■□□□□ 0.2
DFFA-203ENST00000476658 PLXNA3P51805 1871 aa16.33■□□□□ 0.2
DFFA-203ENST00000476658 A0A0C4DFX4 3053 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 KIAA0391O15091 583 aaKnown RBP16.32■□□□□ 0.2
DFFA-203ENST00000476658 CLIC2O15247 247 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 TRAPPC3O43617 180 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 EXTL3O43909 919 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 LILRB3O75022 631 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 GADD45BO75293 160 aaPredicted RBP16.32■□□□□ 0.2
DFFA-203ENST00000476658 IL18RAPO95256 599 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 CNPP09543 421 aaKnown RBP16.32■□□□□ 0.2
DFFA-203ENST00000476658 CYP3A5P20815 502 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 KLRC2P26717 231 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 BRCC3P46736 316 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 GUCY2FP51841 1108 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 ZBTB6Q15916 424 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 KNOP1Q1ED39 458 aaKnown RBP16.32■□□□□ 0.2
DFFA-203ENST00000476658 BMT2Q1RMZ1 405 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 KIAA0319Q5VV43 1072 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 GPD1LQ8N335 351 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 TMEM130Q8N3G9 435 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 BEST2Q8NFU1 509 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 KLHL5Q96PQ7 755 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 TTPALQ9BTX7 342 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 AGPAT3Q9NRZ7 376 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 RBAKQ9NYW8 714 aaPredicted RBP16.32■□□□□ 0.2
DFFA-203ENST00000476658 HSPBP1Q9NZL4 362 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.32■□□□□ 0.2
DFFA-203ENST00000476658 HCFC2Q9Y5Z7 792 aa16.32■□□□□ 0.2
DFFA-203ENST00000476658 MTCL1Q9Y4B5 1905 aaKnown RBP16.31■□□□□ 0.2
DFFA-203ENST00000476658 I3L4J1 428 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 TGFB1I1O43294 461 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 ADH1AP07327 375 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 MCM4P33991 863 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 POU5F1Q01860 360 aaKnown RBP16.31■□□□□ 0.2
DFFA-203ENST00000476658 PNOCQ13519 176 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 RTP2Q5QGT7 225 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 PTCRAQ6ISU1 281 aaPredicted RBP16.31■□□□□ 0.2
DFFA-203ENST00000476658 PRSS55Q6UWB4 352 aaPredicted RBP16.31■□□□□ 0.2
DFFA-203ENST00000476658 CD300LGQ6UXG3 332 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 PPFIBP1Q86W92 1011 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 BRSK2Q8IWQ3 736 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.31■□□□□ 0.2
DFFA-203ENST00000476658 CASP10Q92851 521 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.31■□□□□ 0.2
DFFA-203ENST00000476658 CLEC1BQ9P126 229 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 CD207Q9UJ71 328 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 HOOK1Q9UJC3 728 aaKnown RBP16.31■□□□□ 0.2
DFFA-203ENST00000476658 DERAQ9Y315 318 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 SCN1AP35498 2009 aa16.31■□□□□ 0.2
DFFA-203ENST00000476658 TEX28O15482 410 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 KINO60870 393 aaKnown RBP16.3■□□□□ 0.2
DFFA-203ENST00000476658 RHOBTB3O94955 611 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 EPCAMP16422 314 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 LRPAP1P30533 357 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 CYP2J2P51589 502 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 SNRPFP62306 86 aaKnown RBP16.3■□□□□ 0.2
DFFA-203ENST00000476658 CREMQ03060 361 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 KCNC3Q14003 757 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 KCNB1Q14721 858 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 PSMD5Q16401 504 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 SPATA1Q5VX52 437 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 TMEM184AQ6ZMB5 413 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.3■□□□□ 0.2
DFFA-203ENST00000476658 GLYCTKQ8IVS8 523 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 GOLGA5Q8TBA6 731 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 MSLNLQ96KJ4 702 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 TIGD1Q96MW7 591 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 IPO9Q96P70 1041 aaKnown RBP16.3■□□□□ 0.2
DFFA-203ENST00000476658 CGNQ9P2M7 1197 aaKnown RBP16.3■□□□□ 0.2
DFFA-203ENST00000476658 C2CD2Q9Y426 696 aa16.3■□□□□ 0.2
DFFA-203ENST00000476658 ZNF233A6NK53 670 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 KIF20AO95235 890 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 BMP1P13497 986 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 RPL17P18621 184 aaKnown RBP16.29■□□□□ 0.2
DFFA-203ENST00000476658 TKTP29401 623 aaKnown RBP16.29■□□□□ 0.2
DFFA-203ENST00000476658 WNT7BP56706 349 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 TFAMQ00059 246 aaKnown RBP16.29■□□□□ 0.2
DFFA-203ENST00000476658 PUS10Q3MIT2 529 aaKnown RBP16.29■□□□□ 0.2
DFFA-203ENST00000476658 ANKRD54Q6NXT1 300 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 PDXDC1Q6P996 788 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 CBWD2Q8IUF1 395 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 EFCAB13Q8IY85 973 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 GPR65Q8IYL9 337 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 XXYLT1Q8NBI6 393 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms