RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ACKR2O00590 384 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 HARSP12081 509 aaKnown RBP13.17□□□□□ -0.3
HDAC6-219ENST00000476625 SOX9P48436 509 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 PFKPQ01813 784 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 ZNF174Q15697 407 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 ATF7IP2Q5U623 682 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 ZNF852Q6ZMS4 543 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 TAS1R3Q7RTX0 852 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 ADPGKQ9BRR6 497 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 OSBPL6Q9BZF3 934 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 CDT1Q9H211 546 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 RBM12Q9NTZ6 932 aaKnown RBP13.17□□□□□ -0.3
HDAC6-219ENST00000476625 CDV3Q9UKY7 258 aaKnown RBP13.17□□□□□ -0.3
HDAC6-219ENST00000476625 KCNH3Q9ULD8 1083 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 NUP210Q8TEM1 1887 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-219ENST00000476625 EML5Q05BV3 1969 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 ARHGEF35A5YM69 484 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 PODXLO00592 558 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 PRRG1O14668 218 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 GDF9O60383 454 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 VNN2O95498 520 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 LRG1P02750 347 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 POU2F2P09086 479 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 OR4Q2P0C623 313 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 MYL4P12829 197 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 PTPN2P17706 415 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 CYP11B2P19099 503 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 KCNA4P22459 653 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 GDI1P31150 447 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 ADCY1Q08828 1119 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 ELAVL2Q12926 359 aaKnown RBP13.16□□□□□ -0.3
HDAC6-219ENST00000476625 STXBP5Q5T5C0 1151 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 PRR23BQ6ZRT6 265 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 Q6ZS52 159 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 GTF3C6Q969F1 213 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 ELSPBP1Q96BH3 223 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 C2orf40Q9H1Z8 148 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 BRD9Q9H8M2 597 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 LMAN1LQ9HAT1 526 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 TUFT1Q9NNX1 390 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 CEP72Q9P209 647 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 RALYQ9UKM9 306 aaKnown RBP13.16□□□□□ -0.3
HDAC6-219ENST00000476625 INSL5Q9Y5Q6 135 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 BACE2Q9Y5Z0 518 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 NCOR2Q9Y618 2525 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 MYH11P35749 1972 aa13.16□□□□□ -0.3
HDAC6-219ENST00000476625 ARHGEF37A1IGU5 675 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 CHURC1-FNTBB4DL54 471 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 TBC1D4O60343 1298 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 ABLIM3O94929 683 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 CCNE1P24864 410 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 NAMPTP43490 491 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 RPS9P46781 194 aaKnown RBP13.15□□□□□ -0.3
HDAC6-219ENST00000476625 FNTBP49356 437 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 SPAG1Q07617 926 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 TWF1Q12792 350 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 TEAD2Q15562 447 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 CCDC6Q16204 474 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 UVSSAQ2YD98 709 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 ANKS3Q6ZW76 656 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 ZNF461Q8TAF7 563 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 ZBTB45Q96K62 511 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-219ENST00000476625 ASB16Q96NS5 453 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 BHMT2Q9H2M3 363 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 CHRDQ9H2X0 955 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 CRISPLD1Q9H336 500 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 ZNF334Q9HCZ1 680 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-219ENST00000476625 TUBGCP4Q9UGJ1 667 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 FBXL5Q9UKA1 691 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 PIAS3Q9Y6X2 628 aa13.15□□□□□ -0.3
HDAC6-219ENST00000476625 ZFHX4Q86UP3 3567 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-219ENST00000476625 SLC38A8A6NNN8 435 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 PP2D1A8MPX8 630 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 ABLIM1O14639 778 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 XRCC6P12956 609 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDAC6-219ENST00000476625 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
HDAC6-219ENST00000476625 DCAF4L1Q3SXM0 396 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 ZNF568Q3ZCX4 644 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 HEATR6Q6AI08 1181 aaKnown RBP13.14□□□□□ -0.31
HDAC6-219ENST00000476625 SLC8B1Q6J4K2 584 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 PDXDC1Q6P996 788 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 ALKAL1Q6UXT8 129 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 RNF19BQ6ZMZ0 732 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 MAP4K3Q8IVH8 894 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 DAW1Q8N136 415 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 FAM3CQ92520 227 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 ZFYVE19Q96K21 471 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 PGLYRP2Q96PD5 576 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 NACC1Q96RE7 527 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 ACO2Q99798 780 aaKnown RBP13.14□□□□□ -0.31
HDAC6-219ENST00000476625 POLR3CQ9BUI4 534 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-219ENST00000476625 TRMT61BQ9BVS5 477 aaKnown RBP13.14□□□□□ -0.31
HDAC6-219ENST00000476625 TARS2Q9BW92 718 aaKnown RBP13.14□□□□□ -0.31
HDAC6-219ENST00000476625 ZFP14Q9HCL3 533 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 GDE1Q9NZC3 331 aa13.14□□□□□ -0.31
HDAC6-219ENST00000476625 TIMM13Q9Y5L4 95 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-219ENST00000476625 OBSL1O75147 1896 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms