RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 SNX17Q15036 470 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 NBPF20Q3BBV1 942 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 SLC27A1Q6PCB7 646 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 NT5DC4Q86YG4 428 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 KLHDC9Q8NEP7 349 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 SHC3Q92529 594 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 ZNF516Q92618 1163 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 ACAP3Q96P50 834 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 GPR88Q9GZN0 384 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 ASB7Q9H672 318 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 TRPV2Q9Y5S1 764 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 PTPRJQ12913 1337 aa13.34□□□□□ -0.27
CDKAL1-203ENST00000476517 TDRD15B5MCY1 1934 aaKnown RBP13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 PJA2O43164 708 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 INHAP05111 366 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 ASGR1P07306 291 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 USP8P40818 1118 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 PDE6CP51160 858 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 YARSP54577 528 aaKnown RBP13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 WNT7BP56706 349 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 NOP14P78316 857 aaKnown RBP13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 TFAMQ00059 246 aaKnown RBP13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 CAP1Q01518 475 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 PTPN11Q06124 597 aaPredicted RBP13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 NCOA4Q13772 614 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 ZNF569Q5MCW4 686 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 ZNF571Q7Z3V5 609 aaPredicted RBP13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 CDR2LQ86X02 465 aaPredicted RBP13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 HELQQ8TDG4 1101 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 TAF4BQ92750 862 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 SECISBP2LQ93073 1101 aaKnown RBP13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 ALS2CR12Q96Q35 445 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 TRIM6Q9C030 488 aaPredicted RBP13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 MTMR12Q9C0I1 747 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 PRO3102Q9H379 93 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 HMX1Q9NP08 348 aaPredicted RBP13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 ADAMTS1Q9UHI8 967 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 GUCA1BQ9UMX6 200 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 MROH7Q68CQ1 1323 aa13.33□□□□□ -0.28
CDKAL1-203ENST00000476517 A0A087X0T9 212 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 MOXD2PA6NHM9 499 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 FOXN3O00409 490 aaPredicted RBP13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 ZNF263O14978 683 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 TACC1O75410 805 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 CSDE1O75534 798 aaKnown RBP13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 NPTXRO95502 500 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 FAM228BP0C875 321 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 PNMA6AP0CW24 399 aaPredicted RBP13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 KRT5P13647 590 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 TNFAIP3P21580 790 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 GRK4P32298 578 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 BPIFB4P59827 614 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 YWHAEP62258 255 aaKnown RBP13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 HIC1Q14526 733 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 NAB2Q15742 525 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 KCNA10Q16322 511 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 SGSM1Q2NKQ1 1148 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 TRAPPC11Q7Z392 1133 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 FAM71AQ8IYT1 594 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 CEP120Q8N960 986 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 OR5B17Q8NGF7 314 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 PPP1R13LQ8WUF5 828 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 SPOCK2Q92563 424 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 DHX38Q92620 1227 aaKnown RBP13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 KREMEN1Q96MU8 473 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 TSEN34Q9BSV6 310 aaKnown RBP13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 PI4K2AQ9BTU6 479 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 CELF4Q9BZC1 486 aaKnown RBP13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 INTUQ9ULD6 942 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 PIN4Q9Y237 131 aaKnown RBP13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 PTPN22Q9Y2R2 807 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 TRIM17Q9Y577 477 aa13.32□□□□□ -0.28
CDKAL1-203ENST00000476517 TTC28Q96AY4 2481 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 CTAGE9A4FU28 777 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 VNN1O95497 513 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 ASS1P00966 412 aaKnown RBP13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 PYGBP11216 843 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 FGFR4P22455 802 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 ZNF200P98182 395 aaPredicted RBP13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 CUL2Q13617 745 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 TMEM132DQ14C87 1099 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 IFI16Q16666 785 aaKnown RBP13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 ZNF699Q32M78 642 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 GDF6Q6KF10 455 aaPredicted RBP13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 RPAINQ86UA6 219 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 SERINC5Q86VE9 423 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 EFCAB13Q8IY85 973 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 SLC35F6Q8N357 371 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 TRIM58Q8NG06 486 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 GLT1D1Q96MS3 346 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 NAPGQ99747 312 aaPredicted RBP13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 AGPAT1Q99943 283 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 NIF3L1Q9GZT8 377 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 PLEKHA5Q9HAU0 1116 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 SEPT11Q9NVA2 429 aaKnown RBP13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 NAGPAQ9UK23 515 aa13.31□□□□□ -0.28
CDKAL1-203ENST00000476517 NOD1Q9Y239 953 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms