RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 MYBPC3Q14896 1274 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 LRRC23Q53EV4 343 aaPredicted RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 EAPPQ56P03 285 aaPredicted RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 TCERG1LQ5VWI1 586 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 RHBDF2Q6PJF5 856 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 NCAPG2Q86XI2 1143 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 SLC9A9Q8IVB4 645 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 STK32AQ8WU08 396 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 DNAJC9Q8WXX5 260 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 ELMO3Q96BJ8 720 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 FAM136AQ96C01 138 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 KREMEN1Q96MU8 473 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 MKNK1Q9BUB5 465 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 KIAA1683Q9H0B3 1180 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 TBK1Q9UHD2 729 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 AMFRQ9UKV5 643 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 PRR12Q9ULL5 1215 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 MTA2O94776 668 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 ACSL3O95573 720 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 KRT18P05783 430 aaKnown RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 YY1P25490 414 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 PDE6CP51160 858 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 CCDC15Q0P6D6 951 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 TMEM63BQ5T3F8 832 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 C11orf63Q6NUN7 778 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 VSTM1Q6UX27 236 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 ANKS1BQ7Z6G8 1248 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 NOP9Q86U38 636 aaKnown RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 FBF1Q8TES7 1133 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 DDX1Q92499 740 aaKnown RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 ART4Q93070 314 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 FGD4Q96M96 766 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 PWWP2AQ96N64 755 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 FAM114A2Q9NRY5 505 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 DNAAF2Q9NVR5 837 aaKnown RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 NEU2Q9Y3R4 380 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 DHX15O43143 795 aaKnown RBP8.92□□□□□ -0.98
VAPB-205ENST00000476395 EPS15P42566 896 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 BFSP1Q12934 665 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 MUM1Q2TAK8 710 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 KHDC1Q4VXA5 237 aaKnown RBP8.92□□□□□ -0.98
VAPB-205ENST00000476395 DACT2Q5SW24 774 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 ISLR2Q6UXK2 745 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 ZC3H18Q86VM9 953 aaKnown RBP8.92□□□□□ -0.98
VAPB-205ENST00000476395 HOOK3Q86VS8 718 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 LMNTD2Q8IXW0 634 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 ASAP3Q8TDY4 903 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 FBXO41Q8TF61 875 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 MAIP1Q8WWC4 291 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 SEMA4DQ92854 862 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 AGPAT1Q99943 283 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 ZSWIM1Q9BR11 485 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 TMEM109Q9BVC6 243 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 TUFT1Q9NNX1 390 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 CYP39A1Q9NYL5 469 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 PTPN22Q9Y2R2 807 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 ATP6V1G1O75348 118 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 SUN1O94901 812 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 UNC5CO95185 931 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 CETPP11597 493 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 FUT4P22083 530 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 UBXN2AP68543 259 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 MRPS35P82673 323 aaKnown RBP8.92□□□□□ -0.98
VAPB-205ENST00000476395 ZNF746Q6NUN9 644 aaPredicted RBP8.92□□□□□ -0.98
VAPB-205ENST00000476395 FBXO11Q86XK2 927 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 KBTBD2Q8IY47 623 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 SYCE1Q8N0S2 351 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 CCDC17Q96LX7 622 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 NDNQ99608 321 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 MOV10L1Q9BXT6 1211 aaKnown RBP8.92□□□□□ -0.98
VAPB-205ENST00000476395 RXFP1Q9HBX9 757 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 SLCO1B3Q9NPD5 702 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 COL20A1Q9P218 1284 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 PLSCR1O15162 318 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 RIPK2O43353 540 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 ATP9AO75110 1047 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 SGPL1O95470 568 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 CALCAP01258 141 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 TPP2P29144 1249 aaPredicted RBP8.92□□□□□ -0.98
VAPB-205ENST00000476395 GSTT1P30711 240 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 MYLK4Q86YV6 388 aaPredicted RBP8.92□□□□□ -0.98
VAPB-205ENST00000476395 CDAN1Q8IWY9 1227 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 CYP4X1Q8N118 509 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 EPS8L1Q8TE68 723 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 CBWD1Q9BRT8 395 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 TBC1D10AQ9BXI6 508 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 GLT8D2Q9H1C3 349 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 USH1CQ9Y6N9 552 aa8.92□□□□□ -0.98
VAPB-205ENST00000476395 PFASO15067 1338 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 PHF2O75151 1096 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 COL2A1P02458 1487 aaPredicted RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 ADRB2P07550 413 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 LCTP09848 1927 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 FAM200BP0CF97 657 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 KRT13P13646 458 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 ITGB5P18084 799 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 COMTP21964 271 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 KCNA3P22001 575 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 ADSSP30520 456 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 FOXN2P32314 431 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms