RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 FNBP1Q96RU3 617 aa32.02■■■□□ 2.72
HOXB3-208ENST00000476342 MTCH2Q9Y6C9 303 aa32.02■■■□□ 2.72
HOXB3-208ENST00000476342 DNAJB1P25685 340 aa32.01■■■□□ 2.72
HOXB3-208ENST00000476342 PSMD6Q15008 389 aa32.01■■■□□ 2.72
HOXB3-208ENST00000476342 BICDL2A1A5D9 508 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 F8W810 466 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 WNT7BP56706 349 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 TFAMQ00059 246 aaKnown RBP32■■■□□ 2.71
HOXB3-208ENST00000476342 PDE12Q6L8Q7 609 aaKnown RBP32■■■□□ 2.71
HOXB3-208ENST00000476342 FUT10Q6P4F1 479 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 RBM43Q6ZSC3 357 aaKnown RBP32■■■□□ 2.71
HOXB3-208ENST00000476342 VPS52Q8N1B4 723 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 HASPINQ8TF76 798 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 SYAP1Q96A49 352 aaPredicted RBP32■■■□□ 2.71
HOXB3-208ENST00000476342 MFSD14AQ96MC6 490 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 SF3B1O75533 1304 aaKnown RBP eCLIP32■■■□□ 2.717e-8■■■■■ 58.7
HOXB3-208ENST00000476342 CETN3O15182 167 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 MAPK13O15264 365 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 CSPG5O95196 566 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 CASP4P49662 377 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 FKBP3Q00688 224 aaKnown RBP32■■■□□ 2.71
HOXB3-208ENST00000476342 ELAVL2Q12926 359 aaKnown RBP32■■■□□ 2.71
HOXB3-208ENST00000476342 PAK1Q13153 545 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 CAMK1Q14012 370 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 TIGD5Q53EQ6 642 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 ANKRD40Q6AI12 368 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 MLKLQ8NB16 471 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 NELFBQ8WX92 580 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 ENTPD7Q9NQZ7 604 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 CTNND2Q9UQB3 1225 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 ATG2AQ2TAZ0 1938 aa32■■■□□ 2.71
HOXB3-208ENST00000476342 PRRC2BQ5JSZ5 2229 aaKnown RBP31.99■■■□□ 2.71
HOXB3-208ENST00000476342 TRIM49BA6NDI0 452 aa31.99■■■□□ 2.71
HOXB3-208ENST00000476342 SOD2P04179 222 aa31.99■■■□□ 2.71
HOXB3-208ENST00000476342 TMEM191BP0C7N4 346 aa31.99■■■□□ 2.71
HOXB3-208ENST00000476342 PMS1P54277 932 aaKnown RBP31.99■■■□□ 2.71
HOXB3-208ENST00000476342 FOXR2Q6PJQ5 311 aa31.99■■■□□ 2.71
HOXB3-208ENST00000476342 TMC7Q7Z402 723 aa31.99■■■□□ 2.71
HOXB3-208ENST00000476342 WDR49Q8IV35 697 aa31.99■■■□□ 2.71
HOXB3-208ENST00000476342 MICAL1Q8TDZ2 1067 aa31.99■■■□□ 2.71
HOXB3-208ENST00000476342 CCDC127Q96BQ5 260 aa31.99■■■□□ 2.71
HOXB3-208ENST00000476342 ANKRD36BP1Q96IX9 119 aa31.99■■■□□ 2.71
HOXB3-208ENST00000476342 TCF25Q9BQ70 676 aa31.99■■■□□ 2.71
HOXB3-208ENST00000476342 NGRNQ9NPE2 291 aaKnown RBP31.99■■■□□ 2.71
HOXB3-208ENST00000476342 DPP3Q9NY33 737 aa31.99■■■□□ 2.71
HOXB3-208ENST00000476342 TRAPPC3O43617 180 aa31.98■■■□□ 2.71
HOXB3-208ENST00000476342 DLATP10515 647 aaKnown RBP31.98■■■□□ 2.71
HOXB3-208ENST00000476342 PSMC2P35998 433 aaKnown RBP31.98■■■□□ 2.71
HOXB3-208ENST00000476342 GUCY2FP51841 1108 aa31.98■■■□□ 2.71
HOXB3-208ENST00000476342 USP37Q86T82 979 aa31.98■■■□□ 2.71
HOXB3-208ENST00000476342 CGRRF1Q99675 332 aa31.98■■■□□ 2.71
HOXB3-208ENST00000476342 ZBP1Q9H171 429 aa31.98■■■□□ 2.71
HOXB3-208ENST00000476342 DACH1Q9UI36 760 aa31.98■■■□□ 2.71
HOXB3-208ENST00000476342 NUB1Q9Y5A7 615 aa31.98■■■□□ 2.71
HOXB3-208ENST00000476342 TNNI1P19237 187 aa31.97■■■□□ 2.71
HOXB3-208ENST00000476342 NLRP12P59046 1061 aa31.97■■■□□ 2.71
HOXB3-208ENST00000476342 ERVFC1P60507 584 aa31.97■■■□□ 2.71
HOXB3-208ENST00000476342 KLHL40Q2TBA0 621 aa31.97■■■□□ 2.71
HOXB3-208ENST00000476342 RNF168Q8IYW5 571 aaPredicted RBP31.97■■■□□ 2.71
HOXB3-208ENST00000476342 C3orf58Q8NDZ4 430 aa31.97■■■□□ 2.71
HOXB3-208ENST00000476342 PPP2R3CQ969Q6 453 aa31.97■■■□□ 2.71
HOXB3-208ENST00000476342 MKNK1Q9BUB5 465 aa31.97■■■□□ 2.71
HOXB3-208ENST00000476342 HERC2P3Q9BVR0 1158 aa31.97■■■□□ 2.71
HOXB3-208ENST00000476342 VN1R3Q9BXE9 311 aa31.97■■■□□ 2.71
HOXB3-208ENST00000476342 INTS13Q9NVM9 706 aa31.97■■■□□ 2.71
HOXB3-208ENST00000476342 FSCN2O14926 492 aa31.96■■■□□ 2.71
HOXB3-208ENST00000476342 AKAP3O75969 853 aa31.96■■■□□ 2.71
HOXB3-208ENST00000476342 TNNC2P02585 160 aa31.96■■■□□ 2.71
HOXB3-208ENST00000476342 CTSAP10619 480 aa31.96■■■□□ 2.71
HOXB3-208ENST00000476342 SMC1AQ14683 1233 aaKnown RBP31.96■■■□□ 2.71
HOXB3-208ENST00000476342 DUOXA2Q1HG44 320 aa31.96■■■□□ 2.71
HOXB3-208ENST00000476342 INTS8Q75QN2 995 aaKnown RBP31.96■■■□□ 2.71
HOXB3-208ENST00000476342 FAM186BQ8IYM0 893 aa31.96■■■□□ 2.71
HOXB3-208ENST00000476342 GPR62Q9BZJ7 368 aa31.96■■■□□ 2.71
HOXB3-208ENST00000476342 MTMR12Q9C0I1 747 aa31.96■■■□□ 2.71
HOXB3-208ENST00000476342 NSUN3Q9H649 340 aaKnown RBP31.96■■■□□ 2.71
HOXB3-208ENST00000476342 TMEM63CQ9P1W3 806 aa31.96■■■□□ 2.71
HOXB3-208ENST00000476342 MYO7AQ13402 2215 aa31.96■■■□□ 2.71
HOXB3-208ENST00000476342 EFEMP2O95967 443 aa31.95■■■□□ 2.71
HOXB3-208ENST00000476342 EPB41P11171 864 aaKnown RBP31.95■■■□□ 2.71
HOXB3-208ENST00000476342 IRS1P35568 1242 aa31.95■■■□□ 2.71
HOXB3-208ENST00000476342 USP41Q3LFD5 358 aa31.95■■■□□ 2.71
HOXB3-208ENST00000476342 PLPP4Q5VZY2 271 aa31.95■■■□□ 2.71
HOXB3-208ENST00000476342 C9orf57Q5W0N0 161 aa31.95■■■□□ 2.71
HOXB3-208ENST00000476342 LMBRD2Q68DH5 695 aaPredicted RBP31.95■■■□□ 2.71
HOXB3-208ENST00000476342 CAVIN1Q6NZI2 390 aaKnown RBP31.95■■■□□ 2.71
HOXB3-208ENST00000476342 ZC3H3Q8IXZ2 948 aaKnown RBP31.95■■■□□ 2.71
HOXB3-208ENST00000476342 MICALL1Q8N3F8 863 aa31.95■■■□□ 2.71
HOXB3-208ENST00000476342 PARD3BQ8TEW8 1205 aa31.95■■■□□ 2.71
HOXB3-208ENST00000476342 ITGA11Q9UKX5 1188 aa31.95■■■□□ 2.71
HOXB3-208ENST00000476342 STXBP5LQ9Y2K9 1186 aa31.95■■■□□ 2.71
HOXB3-208ENST00000476342 URODP06132 367 aa31.94■■■□□ 2.7
HOXB3-208ENST00000476342 KRT13P13646 458 aa31.94■■■□□ 2.7
HOXB3-208ENST00000476342 TTI2Q6NXR4 508 aa31.94■■■□□ 2.7
HOXB3-208ENST00000476342 SASS6Q6UVJ0 657 aa31.94■■■□□ 2.7
HOXB3-208ENST00000476342 SSX2IPQ9Y2D8 614 aa31.94■■■□□ 2.7
HOXB3-208ENST00000476342 PTPRJQ12913 1337 aa31.93■■■□□ 2.7
HOXB3-208ENST00000476342 ANO9A1A5B4 782 aa31.93■■■□□ 2.7
HOXB3-208ENST00000476342 SLC16A3O15427 465 aaKnown RBP31.93■■■□□ 2.7
HOXB3-208ENST00000476342 PAX3P23760 479 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms