RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 ARMCX3Q9UH62 379 aaPredicted RBP24■■□□□ 1.43
MCF2L2-209ENST00000475664 RWDD3Q9Y3V2 267 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 NFE2L3Q9Y4A8 694 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 CHD9Q3L8U1 2897 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 TNNI1P19237 187 aa23.99■■□□□ 1.43
MCF2L2-209ENST00000475664 BMPR1AP36894 532 aa23.99■■□□□ 1.43
MCF2L2-209ENST00000475664 OR1G1P47890 313 aa23.99■■□□□ 1.43
MCF2L2-209ENST00000475664 ZNF165P49910 485 aa23.99■■□□□ 1.43
MCF2L2-209ENST00000475664 CCDC40Q4G0X9 1142 aa23.99■■□□□ 1.43
MCF2L2-209ENST00000475664 LRSAM1Q6UWE0 723 aa23.99■■□□□ 1.43
MCF2L2-209ENST00000475664 USP37Q86T82 979 aa23.99■■□□□ 1.43
MCF2L2-209ENST00000475664 CACTINQ8WUQ7 758 aaKnown RBP23.99■■□□□ 1.43
MCF2L2-209ENST00000475664 ZNF516Q92618 1163 aa23.99■■□□□ 1.43
MCF2L2-209ENST00000475664 CARNS1A5YM72 827 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 NRP1O14786 923 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 ALDH2P05091 517 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 TMEM191BP0C7N4 346 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 TRIM49P0CI25 452 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 TRIM49CP0CI26 452 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 CTNNB1P35222 781 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 ALDH7A1P49419 539 aaKnown RBP23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 CLCNKBP51801 687 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 ZNF445P59923 1031 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 NCAPHQ15003 741 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 UPP1Q16831 310 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 DUOXA2Q1HG44 320 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 SLC39A11Q8N1S5 342 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 AOPEPQ8N6M6 819 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 ANKRD36BP1Q96IX9 119 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 CNOT6LQ96LI5 555 aaKnown RBP23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 MARCH5Q9NX47 278 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 DPP3Q9NY33 737 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 FAN1Q9Y2M0 1017 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 PCDHB12Q9Y5F1 795 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 PLXNA4Q9HCM2 1894 aa23.98■■□□□ 1.43
MCF2L2-209ENST00000475664 NT5C1B-RDH14C9J2C7 533 aa23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 C5orf67F2Z3F1 127 aa23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 IKBKBO14920 756 aa23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 RPL9P32969 192 aaKnown RBP23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 AP3M2P53677 418 aa23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 EPC2Q52LR7 807 aa23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 HABP4Q5JVS0 413 aaKnown RBP23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 TMEM173Q86WV6 379 aaPredicted RBP23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 C1orf127Q8N9H9 656 aa23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 CXorf38Q8TB03 319 aa23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 RABGGTAQ92696 567 aa23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 DDX27Q96GQ7 796 aaKnown RBP23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 PLVAPQ9BX97 442 aa23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 SAMSN1Q9NSI8 373 aaKnown RBP23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 PRG3Q9Y2Y8 225 aaPredicted RBP23.97■■□□□ 1.43
MCF2L2-209ENST00000475664 SCN1AP35498 2009 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 TMEM265A0A087WTH1 108 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 ANO9A1A5B4 782 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 F8W810 466 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 TMEM189-UBE2V1I3L0A0 370 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 PODXLO00592 558 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 CAVIN2O95810 425 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 TNNC2P02585 160 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 PPM1AP35813 382 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 CDKAL1Q5VV42 579 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 C9orf57Q5W0N0 161 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 FAM114A1Q8IWE2 563 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 TRIM59Q8IWR1 403 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 DHX40Q8IX18 779 aaKnown RBP23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 BCL7CQ8WUZ0 217 aaPredicted RBP23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 SLC35C1Q96A29 364 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 LRCH3Q96II8 777 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 COLEC11Q9BWP8 271 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 SPG21Q9NZD8 308 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 ITGA11Q9UKX5 1188 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 MTUS1Q9ULD2 1270 aa23.96■■□□□ 1.43
MCF2L2-209ENST00000475664 COL4A4P53420 1690 aaPredicted RBP23.95■■□□□ 1.43
MCF2L2-209ENST00000475664 PPEF2O14830 753 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 KIF4AO95239 1232 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 C4BPAP04003 597 aaKnown RBP23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 RB1P06400 928 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 IGFBP6P24592 240 aaPredicted RBP23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 PPP3CAQ08209 521 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 IQCB1Q15051 598 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 DCAF17Q5H9S7 520 aaPredicted RBP23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 DCLRE1AQ6PJP8 1040 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 C15orf39Q6ZRI6 1047 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 TRAPPC11Q7Z392 1133 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 C3orf58Q8NDZ4 430 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 IGSF21Q96ID5 467 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 TSPY26PQ9H489 355 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 CBX8Q9HC52 389 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 FANCLQ9NW38 375 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 SIX4Q9UIU6 781 aa23.95■■□□□ 1.42
MCF2L2-209ENST00000475664 PIRO00625 290 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 ITGB3P05106 788 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 ITGB1P05556 798 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 GTF2H1P32780 548 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 ZACNQ401N2 412 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 HSP90AA4PQ58FG1 418 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 TCERG1LQ5VWI1 586 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 TDRD10Q5VZ19 366 aaKnown RBP23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 SCARA3Q6AZY7 606 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 CD300LGQ6UXG3 332 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 KLHL23Q8NBE8 558 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms