RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 ASCC2Q9H1I8 757 aaPredicted RBP18.65■□□□□ 0.58
LPCAT1-202ENST00000475622 SMARCAL1Q9NZC9 954 aa18.65■□□□□ 0.58
LPCAT1-202ENST00000475622 FAM47DPA6NHR8 397 aa18.65■□□□□ 0.58
LPCAT1-202ENST00000475622 KDM1AO60341 852 aa18.65■□□□□ 0.58
LPCAT1-202ENST00000475622 MAP4P27816 1152 aaKnown RBP18.65■□□□□ 0.58
LPCAT1-202ENST00000475622 ERP27Q96DN0 273 aa18.65■□□□□ 0.58
LPCAT1-202ENST00000475622 SGSM3Q96HU1 749 aa18.65■□□□□ 0.58
LPCAT1-202ENST00000475622 JPH1Q9HDC5 661 aaPredicted RBP18.65■□□□□ 0.58
LPCAT1-202ENST00000475622 AGAP1Q9UPQ3 857 aa18.65■□□□□ 0.58
LPCAT1-202ENST00000475622 COL15A1P39059 1388 aa18.65■□□□□ 0.58
LPCAT1-202ENST00000475622 NEO1Q92859 1461 aa18.64■□□□□ 0.58
LPCAT1-202ENST00000475622 TLR2O60603 784 aa18.64■□□□□ 0.58
LPCAT1-202ENST00000475622 MRPL1Q9BYD6 325 aaKnown RBP18.64■□□□□ 0.58
LPCAT1-202ENST00000475622 PCMTD2Q9NV79 361 aa18.64■□□□□ 0.58
LPCAT1-202ENST00000475622 KCNJ6P48051 423 aa18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 MRPS15P82914 257 aaKnown RBP18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 C2orf69Q8N8R5 385 aa18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 ZNF189O75820 626 aaPredicted RBP18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 MKRN4PQ13434 485 aaPredicted RBP18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 USP10Q14694 798 aaKnown RBP18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 KYAT1Q16773 422 aa18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 MFN1Q8IWA4 741 aa18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 EME1Q96AY2 570 aa18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 ITIH6Q6UXX5 1313 aa18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 STAT5BP51692 787 aa18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 ZNF200P98182 395 aaPredicted RBP18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 IFNEQ86WN2 208 aa18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 ZNF555Q8NEP9 628 aa18.64■□□□□ 0.57
LPCAT1-202ENST00000475622 SPDYAQ5MJ70 313 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 C12orf60Q5U649 245 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 LRRC8BQ6P9F7 803 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 KIAA2013Q8IYS2 634 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 REEP2Q9BRK0 252 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 ADGBQ8N7X0 1667 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 PDAP1Q13442 181 aaKnown RBP18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 USP33Q8TEY7 942 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 ARHGEF26Q96DR7 871 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 SEC16BQ96JE7 1060 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 MCEEQ96PE7 176 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 KCNK16Q96T55 309 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 C7orf25Q9BPX7 421 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 PHF20Q9BVI0 1012 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 WDR35Q9P2L0 1181 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 UGGT1Q9NYU2 1555 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 NR1I3Q14994 352 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 ZNF772Q68DY9 489 aaPredicted RBP18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 STX19Q8N4C7 294 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 THTPAQ9BU02 230 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 ISCA1Q9BUE6 129 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 SNX9Q9Y5X1 595 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 KIAA0391O15091 583 aaKnown RBP18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 RHOBTB3O94955 611 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 CYP2C19P33261 490 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 UBE3AQ05086 875 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 STK4Q13043 487 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 B4GALNT2Q8NHY0 566 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 CHMP2BQ9UQN3 213 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 DEAF1O75398 565 aaPredicted RBP18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 FDX1P10109 184 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 ATXN3P54252 364 aaPredicted RBP18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 BTNL9Q6UXG8 535 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 RAD9BQ6WBX8 426 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 CLEC4FQ8N1N0 589 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 INPP5DQ92835 1189 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 OTUD5Q96G74 571 aa18.63■□□□□ 0.57
LPCAT1-202ENST00000475622 SERPINB9P50453 376 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 KLC1Q07866 573 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 JAMLQ86YT9 394 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 PTPRN2Q92932 1015 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 DCUN1D1Q96GG9 259 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 TASP1Q9H6P5 420 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 FHOD1Q9Y613 1164 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 AP3B1O00203 1094 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 RAD51CO43502 376 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 FOXO4P98177 505 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 NAB2Q15742 525 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 UGP2Q16851 508 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 FAM118BQ9BPY3 351 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 ARHGEF38Q9NXL2 777 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 PTK7Q13308 1070 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 AGBL2Q5U5Z8 902 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 RBBP8NLQ8NC74 664 aaPredicted RBP18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 TMEM143Q96AN5 459 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 ELMO2Q96JJ3 720 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 RPAP3Q9H6T3 665 aaPredicted RBP18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 STXBP3O00186 592 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 AIM2O14862 343 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 EFCAB14O75071 495 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 KIZQ2M2Z5 673 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 ADCK1Q86TW2 530 aa18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 KLF6Q99612 283 aaPredicted RBP18.62■□□□□ 0.57
LPCAT1-202ENST00000475622 LSP1P33241 339 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 GRIK1P39086 918 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 NCOA4Q13772 614 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 TRPM8Q7Z2W7 1104 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 PALMDQ9NP74 551 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 TMEM161AQ9NX61 479 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 C16orf96A6NNT2 1141 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 STK25O00506 426 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms