RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 PLA2G2FQ9BZM2 168 aa13.86□□□□□ -0.19
SKA3-206ENST00000475251 CCDC113Q9H0I3 377 aa13.86□□□□□ -0.19
SKA3-206ENST00000475251 GJB4Q9NTQ9 266 aa13.86□□□□□ -0.19
SKA3-206ENST00000475251 NCOR2Q9Y618 2525 aa13.86□□□□□ -0.19
SKA3-206ENST00000475251 NOTCH4Q99466 2003 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 DCDC2BA2VCK2 349 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 H7C4K7 107 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 SYN3O14994 580 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 PFKFB2O60825 505 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 KRT37O76014 449 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 ABLIM3O94929 683 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 RETP07949 1114 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 ATF2P15336 505 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 PSMC3P17980 439 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 LIG1P18858 919 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 TGM1P22735 817 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 CNR2P34972 360 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 FZD5Q13467 585 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 GLRA4Q5JXX5 417 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 PRSS36Q5K4E3 855 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 TPGS2Q68CL5 300 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 TCEAL8Q8IYN2 117 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 TNFRSF25Q93038 417 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 MTMR9Q96QG7 549 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 CORO1BQ9BR76 489 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 CYP4F11Q9HBI6 524 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 MAFFQ9ULX9 164 aa13.85□□□□□ -0.19
SKA3-206ENST00000475251 CACNA1BQ00975 2339 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 ARHGEF35A5YM69 484 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 FAM205CA6NFA0 338 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 SLC30A4O14863 429 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 TDGF1P13385 188 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 CYP11B2P19099 503 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 FCARP24071 287 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 CXCL12P48061 93 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 MLLT6P55198 1093 aaPredicted RBP13.84□□□□□ -0.19
SKA3-206ENST00000475251 SPEM2Q0P670 501 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 TRIM29Q14134 588 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 LRRC32Q14392 662 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 GRM2Q14416 872 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 ANKRD1Q15327 319 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 ST3GAL2Q16842 350 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 FAM78AQ5JUQ0 283 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 ATF7IP2Q5U623 682 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 PADI6Q6TGC4 694 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 PRR23BQ6ZRT6 265 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 CATSPER3Q86XQ3 398 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 DDX1Q92499 740 aaKnown RBP13.84□□□□□ -0.19
SKA3-206ENST00000475251 SMARCD2Q92925 531 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 E2F7Q96AV8 911 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 ASB16Q96NS5 453 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 POLR3CQ9BUI4 534 aaPredicted RBP13.84□□□□□ -0.19
SKA3-206ENST00000475251 CCDC94Q9BW85 323 aaPredicted RBP13.84□□□□□ -0.19
SKA3-206ENST00000475251 GPR88Q9GZN0 384 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 LMAN1LQ9HAT1 526 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 ZNF334Q9HCZ1 680 aaPredicted RBP13.84□□□□□ -0.19
SKA3-206ENST00000475251 PIAS3Q9Y6X2 628 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 PHLPP2Q6ZVD8 1323 aa13.84□□□□□ -0.19
SKA3-206ENST00000475251 GPR179Q6PRD1 2367 aa13.83□□□□□ -0.19
SKA3-206ENST00000475251 A0A087WWV3 80 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 WDR27A2RRH5 827 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 ZNF263O14978 683 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 SPATA31C1P0DKV0 1188 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 MUTP22033 750 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 GDI1P31150 447 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 BRCC3P46736 316 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 SIM2Q14190 667 aaPredicted RBP13.83□□□□□ -0.2
SKA3-206ENST00000475251 EEF1DP3Q658K8 133 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 HAUS3Q68CZ6 603 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 MAP4K3Q8IVH8 894 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 ZNF687Q8N1G0 1237 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 BSNDQ8WZ55 320 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 KIFAP3Q92845 792 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 ZNF512Q96ME7 567 aaPredicted RBP13.83□□□□□ -0.2
SKA3-206ENST00000475251 CXCL16Q9H2A7 254 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 PARD6AQ9NPB6 346 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 NUB1Q9Y5A7 615 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 INSL5Q9Y5Q6 135 aa13.83□□□□□ -0.2
SKA3-206ENST00000475251 SMIM28A0A1B0GU29 152 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.82□□□□□ -0.2
SKA3-206ENST00000475251 SHISA7A6NL88 538 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 I3L4J1 428 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 K7ERI5 159 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 PODXLO00592 558 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 RPA1P27694 616 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 RPL9P32969 192 aaKnown RBP13.82□□□□□ -0.2
SKA3-206ENST00000475251 GRM5P41594 1212 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 ARPP19P56211 112 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 CSRP2Q16527 193 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 PPM1JQ5JR12 505 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 ZNF280DQ6N043 979 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 CD300LGQ6UXG3 332 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 VITQ6UXI7 678 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.82□□□□□ -0.2
SKA3-206ENST00000475251 DIS3L2Q8IYB7 885 aaKnown RBP13.82□□□□□ -0.2
SKA3-206ENST00000475251 SPEM1Q8N4L4 309 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 C3orf58Q8NDZ4 430 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 CSGALNACT1Q8TDX6 532 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 CHAMP1Q96JM3 812 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms