RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 KREMEN2Q8NCW0 462 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
SSR1-205ENST00000475213 ZNF707Q96C28 371 aaPredicted RBP13.38□□□□□ -0.27
SSR1-205ENST00000475213 DDX27Q96GQ7 796 aaKnown RBP13.38□□□□□ -0.27
SSR1-205ENST00000475213 FIZ1Q96SL8 496 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 ZHX3Q9H4I2 956 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 ZSCAN16Q9H4T2 348 aaPredicted RBP13.38□□□□□ -0.27
SSR1-205ENST00000475213 CCDC39Q9UFE4 941 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 TBX20Q9UMR3 447 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 MORC2Q9Y6X9 1032 aaPredicted RBP13.38□□□□□ -0.27
SSR1-205ENST00000475213 I3L4J1 428 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 PODXLO00592 558 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 TRAPPC3O43617 180 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 TBCAO75347 108 aaKnown RBP13.37□□□□□ -0.27
SSR1-205ENST00000475213 ASGR2P07307 311 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 CXCL8P10145 99 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 SCP2P22307 547 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 TKTP29401 623 aaKnown RBP13.37□□□□□ -0.27
SSR1-205ENST00000475213 NMT1P30419 496 aaKnown RBP13.37□□□□□ -0.27
SSR1-205ENST00000475213 LIG4P49917 911 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 SLC39A14Q15043 492 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 OTOP3Q7RTS5 596 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 SMG7Q92540 1137 aaKnown RBP13.37□□□□□ -0.27
SSR1-205ENST00000475213 PBXIP1Q96AQ6 731 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 ACSF2Q96CM8 615 aaPredicted RBP13.37□□□□□ -0.27
SSR1-205ENST00000475213 ASIC4Q96FT7 647 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 MFSD14AQ96MC6 490 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 PRKD2Q9BZL6 878 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 WDR6Q9NNW5 1121 aaKnown RBP13.37□□□□□ -0.27
SSR1-205ENST00000475213 ZDHHC7Q9NXF8 308 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 STK17AQ9UEE5 414 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 FBXW11Q9UKB1 542 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 SORCS3Q9UPU3 1222 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 ANK1P16157 1881 aa13.37□□□□□ -0.27
SSR1-205ENST00000475213 HNRNPDLO14979 420 aaKnown RBP13.36□□□□□ -0.27
SSR1-205ENST00000475213 SNPHO15079 494 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 N4BP1O75113 896 aaKnown RBP13.36□□□□□ -0.27
SSR1-205ENST00000475213 ZMYND10O75800 440 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 PIGRP01833 764 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 RPL9P32969 192 aaKnown RBP13.36□□□□□ -0.27
SSR1-205ENST00000475213 PLA2G5P39877 138 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 TXLNAP40222 546 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 TNFSF9P41273 254 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 NASPP49321 788 aaPredicted RBP13.36□□□□□ -0.27
SSR1-205ENST00000475213 GTF2BQ00403 316 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 MTMR3Q13615 1198 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 RRAGBQ5VZM2 374 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 RSPO2Q6UXX9 243 aaPredicted RBP13.36□□□□□ -0.27
SSR1-205ENST00000475213 DYMQ7RTS9 669 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 KRI1Q8N9T8 703 aaKnown RBP13.36□□□□□ -0.27
SSR1-205ENST00000475213 SMOC2Q9H3U7 446 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 PLEKHA5Q9HAU0 1116 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 MTRRQ9UBK8 725 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 CLUHO75153 1309 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 KMT2EQ8IZD2 1858 aa13.36□□□□□ -0.27
SSR1-205ENST00000475213 TTC26A0AVF1 554 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 FAM189A1O60320 539 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 CLTAP09496 248 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 OR1D2P34982 312 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 SPAG1Q07617 926 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 RAB33AQ14088 237 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 ZC2HC1CQ53FD0 456 aaPredicted RBP13.35□□□□□ -0.27
SSR1-205ENST00000475213 ZBTB41Q5SVQ8 909 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 SLC39A4Q6P5W5 647 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 ANKS3Q6ZW76 656 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 SV2BQ7L1I2 683 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 MAP4K3Q8IVH8 894 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 HSCBQ8IWL3 235 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 UBALD2Q8IYN6 164 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 TMEM130Q8N3G9 435 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 DDX12PQ92771 950 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 STAMQ92783 540 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 FAM122AQ96E09 287 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 MFRPQ9BY79 579 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 ST6GALNAC4Q9H4F1 302 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 PIDD1Q9HB75 910 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 TUBGCP4Q9UGJ1 667 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 BACE2Q9Y5Z0 518 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 CDY1Q9Y6F8 540 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 NOTCH4Q99466 2003 aa13.35□□□□□ -0.27
SSR1-205ENST00000475213 A0A087X0B3 334 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 A0A0B4J269 797 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 MYMKA6NI61 221 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 LACTBL1A8MY62 500 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 SYN3O14994 580 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 OGTO15294 1046 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 C8AP07357 584 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 GBP2P32456 591 aaPredicted RBP13.34□□□□□ -0.27
SSR1-205ENST00000475213 ABCD1P33897 745 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 PPP2R3AQ06190 1150 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 STK38Q15208 465 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 ZBTB6Q15916 424 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 ENOX2Q16206 610 aaKnown RBP13.34□□□□□ -0.27
SSR1-205ENST00000475213 KYAT1Q16773 422 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 VARS2Q5ST30 1063 aaKnown RBP13.34□□□□□ -0.27
SSR1-205ENST00000475213 AXDND1Q5T1B0 1012 aaPredicted RBP13.34□□□□□ -0.27
SSR1-205ENST00000475213 LIN9Q5TKA1 542 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 SFR1Q86XK3 245 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 LINC00301Q8NCQ3 95 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms