RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 NR3C1P04150 777 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 NFICP08651 508 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 IGFBP6P24592 240 aaPredicted RBP18.37■□□□□ 0.53
SCAF11-206ENST00000474828 MCM4P33991 863 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 IRS1P35568 1242 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 PSMD6Q15008 389 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 SURF1Q15526 300 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 KIAA0319Q5VV43 1072 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 MRPL43Q8N983 215 aaKnown RBP18.37■□□□□ 0.53
SCAF11-206ENST00000474828 KIF12Q96FN5 646 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 DHTKD1Q96HY7 919 aaPredicted RBP18.37■□□□□ 0.53
SCAF11-206ENST00000474828 GPR62Q9BZJ7 368 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 NSUN3Q9H649 340 aaKnown RBP18.37■□□□□ 0.53
SCAF11-206ENST00000474828 GOLGA2P5Q9HBQ8 144 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 CACNG4Q9UBN1 327 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 MAPK8IP1Q9UQF2 711 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 PRG3Q9Y2Y8 225 aaPredicted RBP18.37■□□□□ 0.53
SCAF11-206ENST00000474828 PRUNE2Q8WUY3 3088 aa18.37■□□□□ 0.53
SCAF11-206ENST00000474828 XIRP2A4UGR9 3374 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 GOLGA8IPA6NC78 632 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 GOLGA8JA6NMD2 632 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 PIRO00625 290 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 CALUO43852 315 aaPredicted RBP18.36■□□□□ 0.53
SCAF11-206ENST00000474828 MBD3O95983 291 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 C1RP00736 705 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 CD44P16070 742 aaKnown RBP18.36■□□□□ 0.53
SCAF11-206ENST00000474828 DSG1Q02413 1049 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 CYP24A1Q07973 514 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 ELAVL2Q12926 359 aaKnown RBP18.36■□□□□ 0.53
SCAF11-206ENST00000474828 KCNC3Q14003 757 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 TMEM132DQ14C87 1099 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 PRRC2BQ5JSZ5 2229 aaKnown RBP18.36■□□□□ 0.53
SCAF11-206ENST00000474828 FUT10Q6P4F1 479 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 VPS52Q8N1B4 723 aa18.36■□□□□ 0.53
SCAF11-206ENST00000474828 SPTBN5Q9NRC6 3674 aaKnown RBP18.36■□□□□ 0.53
SCAF11-206ENST00000474828 MYO9BQ13459 2157 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 SF3B1O75533 1304 aaKnown RBP eCLIP18.35■□□□□ 0.531e-6■■■■■ 107.2
SCAF11-206ENST00000474828 PODXLO00592 558 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 FGFR3P22607 806 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 IGFBP4P22692 258 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 CYP2J2P51589 502 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 LRRC63Q05C16 580 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 SPAG1Q07617 926 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 CAMK4Q16566 473 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 CTC1Q2NKJ3 1217 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 TAS1R1Q7RTX1 841 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 BEST2Q8NFU1 509 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 MAFAQ8NHW3 353 aaPredicted RBP18.35■□□□□ 0.53
SCAF11-206ENST00000474828 BORCS6Q96GS4 357 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 TCF25Q9BQ70 676 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 NUP62CLQ9H1M0 184 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 RXFP1Q9HBX9 757 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 PDE11AQ9HCR9 933 aa18.35■□□□□ 0.53
SCAF11-206ENST00000474828 PTPRJQ12913 1337 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 C2orf71A6NGG8 1288 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 EXOC3O60645 756 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 TADA2AO75478 443 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 B3GAT3O94766 335 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 CCNE1P24864 410 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 RPL13P26373 211 aaKnown RBP18.34■□□□□ 0.53
SCAF11-206ENST00000474828 PMS1P54277 932 aaKnown RBP18.34■□□□□ 0.53
SCAF11-206ENST00000474828 SMC1AQ14683 1233 aaKnown RBP18.34■□□□□ 0.53
SCAF11-206ENST00000474828 PTPN14Q15678 1187 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 C9orf57Q5W0N0 161 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 WDR49Q8IV35 697 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 PLEKHO2Q8TD55 490 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 PARD3BQ8TEW8 1205 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 MKNK1Q9BUB5 465 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 COL25A1Q9BXS0 654 aaPredicted RBP18.34■□□□□ 0.53
SCAF11-206ENST00000474828 INTS13Q9NVM9 706 aa18.34■□□□□ 0.53
SCAF11-206ENST00000474828 CUL9Q8IWT3 2517 aa18.33■□□□□ 0.53
SCAF11-206ENST00000474828 FSD2A1L4K1 749 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 HIDE1A8MVS5 230 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 M0QZQ0 153 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 PSMA7O14818 248 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 NCK2O43639 380 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 NR2F2P24468 414 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 CASP4P49662 377 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 HYAL1Q12794 435 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 USP41Q3LFD5 358 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 TCEAL5Q5H9L2 206 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 ANKRD40Q6AI12 368 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 TTI2Q6NXR4 508 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 TMEM184AQ6ZMB5 413 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.33■□□□□ 0.52
SCAF11-206ENST00000474828 C1orf127Q8N9H9 656 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 TMC2Q8TDI7 906 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 RABGGTAQ92696 567 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 SUSD3Q96L08 255 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 CDCA3Q99618 268 aaPredicted RBP18.33■□□□□ 0.52
SCAF11-206ENST00000474828 DPP3Q9NY33 737 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 FNIP2Q9P278 1114 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 SSX2IPQ9Y2D8 614 aa18.33■□□□□ 0.52
SCAF11-206ENST00000474828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.32■□□□□ 0.52
SCAF11-206ENST00000474828 SYN3O14994 580 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 TRAPPC3O43617 180 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 AKAP3O75969 853 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 LILRA4P59901 499 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 ADAM9Q13443 819 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 STIM1Q13586 685 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms