RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TCHPQ9BT92 498 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 FAM49AQ9H0Q0 323 aaPredicted RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 VRTNQ9H8Y1 702 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 RRAGDQ9NQL2 400 aaPredicted RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 CHST12Q9NRB3 414 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 TOPORSQ9NS56 1045 aaPredicted RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 ARHGAP20Q9P2F6 1191 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 ANKFY1Q9P2R3 1169 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 DNAJC12Q9UKB3 198 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 AJAP1Q9UKB5 411 aaPredicted RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 NENFQ9UMX5 172 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 CNTN6Q9UQ52 1028 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 DERAQ9Y315 318 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 FHOD1Q9Y613 1164 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 ADGRG1Q9Y653 693 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 BZW2Q9Y6E2 419 aaKnown RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 EPN1Q9Y6I3 576 aaPredicted RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 A0A0U1RQG5 324 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 A0A1W2PQ45 241 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 A0A1W2PQY0 241 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 SOWAHDA6NJG2 315 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 F8VZ95 297 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 ARVCFO00192 962 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 DPYSL4O14531 572 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 CCP110O43303 1012 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 ATP8B3O60423 1300 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 LRRN2O75325 713 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 ERLIN2O94905 339 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 NDUFA10O95299 355 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 ASS1P00966 412 aaKnown RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 TUBB4AP04350 444 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 SERPING1P05155 500 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 FERP16591 822 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 SOX5P35711 763 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 STAT1P42224 750 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 PRR20EP86478 221 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 PRR20CP86479 221 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 PRR20DP86480 221 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 PRR20BP86481 221 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 PRR20AP86496 221 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 NCBP1Q09161 790 aaKnown RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 DSC3Q14574 896 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 MTF1Q14872 753 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 PTGISQ16647 500 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 DUOXA2Q1HG44 320 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 TSR1Q2NL82 804 aaKnown RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 C1orf53Q5VUE5 145 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 SFMBT2Q5VUG0 894 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 MROH7Q68CQ1 1323 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 TREML4Q6UXN2 200 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 CATSPER4Q7RTX7 472 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 TRAPPC11Q7Z392 1133 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 CACNA2D4Q7Z3S7 1137 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 APBB1IPQ7Z5R6 666 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 ZBTB33Q86T24 672 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 EFCAB13Q8IY85 973 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 TMEM192Q8IY95 271 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 FAM71AQ8IYT1 594 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 UBR7Q8N806 425 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 USP38Q8NB14 1042 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 OR5B17Q8NGF7 314 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 OLIG1Q8TAK6 271 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 SH3TC2Q8TF17 1288 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 PPP1R13LQ8WUF5 828 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 SHC3Q92529 594 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 TAF4BQ92750 862 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 EVPLQ92817 2033 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 CCDC127Q96BQ5 260 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 ARMC5Q96C12 935 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 CPB2Q96IY4 423 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 KREMEN1Q96MU8 473 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 ADPGKQ9BRR6 497 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 UNC93B1Q9H1C4 597 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 FAM124BQ9H5Z6 455 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 NHEJ1Q9H9Q4 299 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 RPF1Q9H9Y2 349 aaKnown RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 ERVK-5Q9HDB9 667 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 NLRC4Q9NPP4 1024 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 ZNHIT6Q9NWK9 470 aaKnown RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 PPP2R2CQ9Y2T4 447 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 REXO2Q9Y3B8 237 aaKnown RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 NOC2LQ9Y3T9 749 aaKnown RBP7.14□□□□□ -1.27
ATG4A-207ENST00000474825 C2CD2Q9Y426 696 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 CDY2AQ9Y6F7 541 aa7.14□□□□□ -1.27
ATG4A-207ENST00000474825 GOLGA6L9A6NEM1 432 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 LACTBL1A8MY62 500 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 SMAPO00193 183 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 ZNF263O14978 683 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 ZSCAN12O43309 604 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 MAP3K7O43318 606 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 ZNF623O75123 536 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 CST3P01034 146 aaPredicted RBP7.13□□□□□ -1.27
ATG4A-207ENST00000474825 CD4P01730 458 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 HLA-DRAP01903 254 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 DLATP10515 647 aaKnown RBP7.13□□□□□ -1.27
ATG4A-207ENST00000474825 CCL5P13501 91 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 KCNE1P15382 129 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 TNNI1P19237 187 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 ACO1P21399 889 aaKnown RBP7.13□□□□□ -1.27
ATG4A-207ENST00000474825 FGFR4P22455 802 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms