RNA–Protein interactions for RNA: ENST00000474721.1

PIKFYVE-208, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, human

TSL 4

Gene PIKFYVE, Length 538 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIKFYVE-208	ENST00000474721	UBE3B	Q7Z3V4	1068 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	NPM2	Q86SE8	214 aa	Known RBP	4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	FITM2	Q8N6M3	262 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	CLRN3	Q8NCR9	226 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	TSPEAR	Q8WU66	669 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	CASKIN2	Q8WXE0	1202 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	MARS2	Q96GW9	593 aa	Known RBP	4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	UROC1	Q96N76	676 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	LDAH	Q9H6V9	325 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	IL17RB	Q9NRM6	502 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	FBXO34	Q9NWN3	711 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	POLR2A	P24928	1970 aa	Known RBP	4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	WNT10B	O00744	389 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	NEMP1	O14524	444 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	PRSS23	O95084	383 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	GSPT1	P15170	499 aa	Known RBP	4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	GUCY1A2	P33402	732 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	ANO4	Q32M45	955 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	KIAA1614	Q5VZ46	1190 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SEM1	Q6ZVN7	128 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	PTF1A	Q7RTS3	328 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SCARB1	Q8WTV0	552 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	TGFBRAP1	Q8WUH2	860 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	NUP133	Q8WUM0	1156 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	ANKS1A	Q92625	1134 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	CYFIP2	Q96F07	1278 aa		4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.58	□□□□□ -1.68
PIKFYVE-208	ENST00000474721		A0A087X0B3	334 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	CCDC78	A2IDD5	438 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	YY2	O15391	372 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	GPD1	P21695	349 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	ID4	P47928	161 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	ZNF81	P51508	661 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	ATP2B3	Q16720	1220 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	GEN1	Q17RS7	908 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	KAZN	Q674X7	775 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	ZNF788	Q6ZQV5	615 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SSH3	Q8TE77	659 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	MYOC	Q99972	504 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	GSTO2	Q9H4Y5	243 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	CPNE5	Q9HCH3	593 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SLC23A1	Q9UHI7	598 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SCOC	Q9UIL1	159 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	APOBEC2	Q9Y235	224 aa	Known RBP	4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	ACTL7A	Q9Y615	435 aa		4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	MRPL42	Q9Y6G3	142 aa	Known RBP	4.57	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	PROB1	E7EW31	1015 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	FPR1	P21462	350 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	MCAM	P43121	646 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SLC5A3	P53794	718 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SCAND1	P57086	179 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	CREM	Q03060	361 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	MALL	Q13021	153 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SF3B3	Q15393	1217 aa	Known RBP	4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	TOR2A	Q5JU69	321 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SH2D3C	Q8N5H7	860 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	TBC1D15	Q8TC07	691 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	CCHCR1	Q8TD31	782 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	FBXL20	Q96IG2	436 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	TIMP4	Q99727	224 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	DMRT3	Q9NQL9	472 aa		4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	RUVBL1	Q9Y265	456 aa	Known RBP	4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	COL3A1	P02461	1466 aa	Predicted RBP	4.56	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	CDHR4	A6H8M9	788 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	MPPED1	O15442	326 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	GPR32	O75388	356 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	NOMO3	P69849	1222 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	PPP3CA	Q08209	521 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	FAP	Q12884	760 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	STRN3	Q13033	797 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	NOMO2	Q5JPE7	1267 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	LMBR1	Q8WVP7	490 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	HOXB13	Q92826	284 aa	Predicted RBP	4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	MANSC1	Q9H8J5	431 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	HSFX1	Q9UBD0	423 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	ENTPD2	Q9Y5L3	495 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	CUX2	O14529	1486 aa		4.55	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	TCRBV7S2A1N4T	A0A589	114 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	FAM171A2	A8MVW0	826 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	KIAA0391	O15091	583 aa	Known RBP	4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	WT1	P19544	449 aa	Predicted RBP	4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	PCSK1	P29120	753 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	CTGF	P29279	349 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SOX10	P56693	466 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	FPGS	Q05932	587 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	NBPF8	Q3BBV2	869 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	TSTD2	Q5T7W7	516 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	VWA1	Q6PCB0	445 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	KCNK18	Q7Z418	384 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SARAF	Q96BY9	339 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	C1QTNF7	Q9BXJ2	289 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	DNM3	Q9UQ16	869 aa		4.54	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	ZFPL1	O95159	310 aa		4.53	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	SRGN	P10124	158 aa		4.53	□□□□□ -1.68
PIKFYVE-208	ENST00000474721	GRIA3	P42263	894 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms