RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 ISM2Q6H9L7 571 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 FUT10Q6P4F1 479 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 RBM23Q86U06 439 aaKnown RBP10.32□□□□□ -0.76
APTX-219ENST00000474658 C12orf56Q8IXR9 622 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 SMYD4Q8IYR2 804 aaPredicted RBP10.32□□□□□ -0.76
APTX-219ENST00000474658 RNF168Q8IYW5 571 aaPredicted RBP10.32□□□□□ -0.76
APTX-219ENST00000474658 MRPL43Q8N983 215 aaKnown RBP10.32□□□□□ -0.76
APTX-219ENST00000474658 RDH13Q8NBN7 331 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 C3orf58Q8NDZ4 430 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
APTX-219ENST00000474658 TSPAN18Q96SJ8 248 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 HERC2P3Q9BVR0 1158 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 IGFLR1Q9H665 355 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 ASB7Q9H672 318 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 NGRNQ9NPE2 291 aaKnown RBP10.32□□□□□ -0.76
APTX-219ENST00000474658 PRDM6Q9NQX0 595 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 RBAKQ9NYW8 714 aaPredicted RBP10.32□□□□□ -0.76
APTX-219ENST00000474658 CGNQ9P2M7 1197 aaKnown RBP10.32□□□□□ -0.76
APTX-219ENST00000474658 MAN1B1Q9UKM7 699 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 UBQLN1Q9UMX0 589 aaKnown RBP10.32□□□□□ -0.76
APTX-219ENST00000474658 ANK1P16157 1881 aa10.32□□□□□ -0.76
APTX-219ENST00000474658 PRRC2BQ5JSZ5 2229 aaKnown RBP10.31□□□□□ -0.76
APTX-219ENST00000474658 PRUNE2Q8WUY3 3088 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 C2orf71A6NGG8 1288 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 ZNF233A6NK53 670 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 TMEM189-UBE2V1I3L0A0 370 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 PDXKO00764 312 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 C2CD2LO14523 706 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 XPOTO43592 962 aaKnown RBP10.31□□□□□ -0.76
APTX-219ENST00000474658 IL18RAPO95256 599 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 CYP3A5P20815 502 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 NRIP1P48552 1158 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 BMS1Q14692 1282 aaKnown RBP10.31□□□□□ -0.76
APTX-219ENST00000474658 TMEM132DQ14C87 1099 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 CAMK4Q16566 473 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 KIAA0319Q5VV43 1072 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 SPATA1Q5VX52 437 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 CBWD2Q8IUF1 395 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 BRSK2Q8IWQ3 736 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 EFCAB13Q8IY85 973 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 GUF1Q8N442 669 aaKnown RBP10.31□□□□□ -0.76
APTX-219ENST00000474658 XXYLT1Q8NBI6 393 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 BEST2Q8NFU1 509 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 GOLGA5Q8TBA6 731 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 B3GALT6Q96L58 329 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 FBXL18Q96ME1 805 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 TLE6Q9H808 572 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 KIAA1586Q9HCI6 787 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 PDE11AQ9HCR9 933 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 MRPL17Q9NRX2 175 aaKnown RBP10.31□□□□□ -0.76
APTX-219ENST00000474658 DMAC2Q9NW81 257 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 STK39Q9UEW8 545 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 DERAQ9Y315 318 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 XIRP2A4UGR9 3374 aa10.31□□□□□ -0.76
APTX-219ENST00000474658 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.3□□□□□ -0.76
APTX-219ENST00000474658 I3L4J1 428 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 LINC01565O15544 149 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 CALUO43852 315 aaPredicted RBP10.3□□□□□ -0.76
APTX-219ENST00000474658 EXOC3O60645 756 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 LILRB3O75022 631 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 NR3C1P04150 777 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 URODP06132 367 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 LRPAP1P30533 357 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 PRCPP42785 496 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 BRCC3P46736 316 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 GLUD2P49448 558 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 TFAMQ00059 246 aaKnown RBP10.3□□□□□ -0.76
APTX-219ENST00000474658 PTPN14Q15678 1187 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 SNRNP35Q16560 246 aaKnown RBP10.3□□□□□ -0.76
APTX-219ENST00000474658 DUSP6Q16828 381 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 USP41Q3LFD5 358 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 FAM171A1Q5VUB5 890 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 KIAA1841Q6NSI8 718 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 CEP57Q86XR8 500 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 PPP2R3CQ969Q6 453 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 FAM84AQ96KN4 292 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 CHST7Q9NS84 486 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 TRAF3IP3Q9Y228 551 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 C2CD2Q9Y426 696 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 NUB1Q9Y5A7 615 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.3□□□□□ -0.76
APTX-219ENST00000474658 IRAK3Q9Y616 596 aa10.3□□□□□ -0.76
APTX-219ENST00000474658 SF3B1O75533 1304 aaKnown RBP eCLIP10.3□□□□□ -0.765e-11■■■■■ 34.5
APTX-219ENST00000474658 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.29□□□□□ -0.76
APTX-219ENST00000474658 GOLGA6L22H0YM25 854 aa10.29□□□□□ -0.76
APTX-219ENST00000474658 BIN1O00499 593 aa10.29□□□□□ -0.76
APTX-219ENST00000474658 PIRO00625 290 aa10.29□□□□□ -0.76
APTX-219ENST00000474658 PPEF2O14830 753 aa10.29□□□□□ -0.76
APTX-219ENST00000474658 TRAPPC3O43617 180 aa10.29□□□□□ -0.76
APTX-219ENST00000474658 NCK2O43639 380 aa10.29□□□□□ -0.76
APTX-219ENST00000474658 CLASP2O75122 1294 aaKnown RBP10.29□□□□□ -0.76
APTX-219ENST00000474658 CNPP09543 421 aaKnown RBP10.29□□□□□ -0.76
APTX-219ENST00000474658 BMP6P22004 513 aa10.29□□□□□ -0.76
APTX-219ENST00000474658 FGFR3P22607 806 aa10.29□□□□□ -0.76
APTX-219ENST00000474658 CASP4P49662 377 aa10.29□□□□□ -0.76
APTX-219ENST00000474658 RBM10P98175 930 aaKnown RBP10.29□□□□□ -0.76
APTX-219ENST00000474658 DSG1Q02413 1049 aa10.29□□□□□ -0.76
APTX-219ENST00000474658 CYP24A1Q07973 514 aa10.29□□□□□ -0.76
APTX-219ENST00000474658 ELAVL2Q12926 359 aaKnown RBP10.29□□□□□ -0.76
APTX-219ENST00000474658 ADAM15Q13444 863 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms