RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 SPPL3Q8TCT6 385 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 CDX2Q99626 313 aaPredicted RBP17.06■□□□□ 0.32
COL1A1-204ENST00000474644 COLEC11Q9BWP8 271 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 VN1R3Q9BXE9 311 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 MTMR10Q9NXD2 777 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 LZTS1Q9Y250 596 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 FRMD4BQ9Y2L6 1034 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 UNC80Q8N2C7 3258 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 TMEM189-UBE2V1I3L0A0 370 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 CETN3O15182 167 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 MAPK13O15264 365 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 LRPAP1P30533 357 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 STX17P56962 302 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 TFAMQ00059 246 aaKnown RBP17.05■□□□□ 0.32
COL1A1-204ENST00000474644 FKBP3Q00688 224 aaKnown RBP17.05■□□□□ 0.32
COL1A1-204ENST00000474644 KRT17Q04695 432 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 UBE3AQ05086 875 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 LMBRD2Q68DH5 695 aaPredicted RBP17.05■□□□□ 0.32
COL1A1-204ENST00000474644 WDR49Q8IV35 697 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 FAM186BQ8IYM0 893 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 PLEKHO2Q8TD55 490 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 HASPINQ8TF76 798 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 POF1BQ8WVV4 589 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 MYLIPQ8WY64 445 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 CCDC127Q96BQ5 260 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 DDX27Q96GQ7 796 aaKnown RBP17.05■□□□□ 0.32
COL1A1-204ENST00000474644 CGRRF1Q99675 332 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 DUSP9Q99956 384 aaKnown RBP17.05■□□□□ 0.32
COL1A1-204ENST00000474644 LMAN2LQ9H0V9 348 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 ADAM28Q9UKQ2 775 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 PLXNA4Q9HCM2 1894 aa17.05■□□□□ 0.32
COL1A1-204ENST00000474644 PPEF2O14830 753 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 SLC16A3O15427 465 aaKnown RBP17.04■□□□□ 0.32
COL1A1-204ENST00000474644 CSPG5O95196 566 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 EFEMP2O95967 443 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 DLATP10515 647 aaKnown RBP17.04■□□□□ 0.32
COL1A1-204ENST00000474644 IGFBP6P24592 240 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-204ENST00000474644 RPL9P32969 192 aaKnown RBP17.04■□□□□ 0.32
COL1A1-204ENST00000474644 PSMC2P35998 433 aaKnown RBP17.04■□□□□ 0.32
COL1A1-204ENST00000474644 CAMK1Q14012 370 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 NFKBIBQ15653 356 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 SKOR2Q2VWA4 1001 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-204ENST00000474644 DCLRE1AQ6PJP8 1040 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 SASS6Q6UVJ0 657 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 DDX53Q86TM3 631 aaKnown RBP17.04■□□□□ 0.32
COL1A1-204ENST00000474644 OR5B17Q8NGF7 314 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 MED15Q96RN5 788 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 FNBP1Q96RU3 617 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 GAS2L1Q99501 681 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-204ENST00000474644 MKNK1Q9BUB5 465 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 MTMR12Q9C0I1 747 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 INTS13Q9NVM9 706 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 DPP3Q9NY33 737 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 DACH1Q9UI36 760 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 RWDD2AQ9UIY3 292 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 TRIP11Q15643 1979 aa17.04■□□□□ 0.32
COL1A1-204ENST00000474644 SF3B1O75533 1304 aaKnown RBP eCLIP17.03■□□□□ 0.32
COL1A1-204ENST00000474644 LRRIQ3A6PVS8 624 aaPredicted RBP17.03■□□□□ 0.32
COL1A1-204ENST00000474644 TADA2AO75478 443 aa17.03■□□□□ 0.32
COL1A1-204ENST00000474644 B3GAT3O94766 335 aa17.03■□□□□ 0.32
COL1A1-204ENST00000474644 TMEM191BP0C7N4 346 aa17.03■□□□□ 0.32
COL1A1-204ENST00000474644 STX1AQ16623 288 aa17.03■□□□□ 0.32
COL1A1-204ENST00000474644 PTPROQ16827 1216 aa17.03■□□□□ 0.32
COL1A1-204ENST00000474644 C9orf57Q5W0N0 161 aa17.03■□□□□ 0.32
COL1A1-204ENST00000474644 FUT10Q6P4F1 479 aa17.03■□□□□ 0.32
COL1A1-204ENST00000474644 CD300LGQ6UXG3 332 aa17.03■□□□□ 0.32
COL1A1-204ENST00000474644 INTS8Q75QN2 995 aaKnown RBP17.03■□□□□ 0.32
COL1A1-204ENST00000474644 RNF168Q8IYW5 571 aaPredicted RBP17.03■□□□□ 0.32
COL1A1-204ENST00000474644 C1orf127Q8N9H9 656 aa17.03■□□□□ 0.32
COL1A1-204ENST00000474644 PARD3BQ8TEW8 1205 aa17.03■□□□□ 0.32
COL1A1-204ENST00000474644 CACTINQ8WUQ7 758 aaKnown RBP17.03■□□□□ 0.32
COL1A1-204ENST00000474644 MRPL38Q96DV4 380 aaKnown RBP17.03■□□□□ 0.32
COL1A1-204ENST00000474644 POP1Q99575 1024 aaKnown RBP17.03■□□□□ 0.32
COL1A1-204ENST00000474644 TLR9Q9NR96 1032 aa17.03■□□□□ 0.32
COL1A1-204ENST00000474644 PUF60Q9UHX1 559 aaKnown RBP17.03■□□□□ 0.32
COL1A1-204ENST00000474644 ANO9A1A5B4 782 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 FSCN2O14926 492 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 TNNC2P02585 160 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 SOD2P04179 222 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 EPB41P11171 864 aaKnown RBP17.02■□□□□ 0.32
COL1A1-204ENST00000474644 FOSL2P15408 326 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 TNNI1P19237 187 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 IRS1P35568 1242 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 ERVFC1P60507 584 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 DLG4P78352 724 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 CLDN10P78369 228 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 BFSP1Q12934 665 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 VPS52Q8N1B4 723 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 CSGALNACT2Q8N6G5 542 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 CXorf38Q8TB03 319 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 TMC2Q8TDI7 906 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 BORCS6Q96GS4 357 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 ANKRD36BP1Q96IX9 119 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 CEP63Q96MT8 703 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 TCF25Q9BQ70 676 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 HERC2P3Q9BVR0 1158 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 GPR62Q9BZJ7 368 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 ZBP1Q9H171 429 aa17.02■□□□□ 0.32
COL1A1-204ENST00000474644 STK39Q9UEW8 545 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms