RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 LNX1Q8TBB1 728 aaPredicted RBP16.51■□□□□ 0.23
VARS-223ENST00000474643 SPIRE2Q8WWL2 714 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 CLSTN3Q9BQT9 956 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 CXCL16Q9H2A7 254 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 STK17AQ9UEE5 414 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 FBXW11Q9UKB1 542 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 CDY1Q9Y6F8 540 aa16.51■□□□□ 0.23
VARS-223ENST00000474643 NPHP3-ACAD11A0A0J9YXS1 232 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 I3L4J1 428 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 PODXLO00592 558 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 TBCAO75347 108 aaKnown RBP16.5■□□□□ 0.23
VARS-223ENST00000474643 TOM1L1O75674 476 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 CFHP08603 1231 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 TKTP29401 623 aaKnown RBP16.5■□□□□ 0.23
VARS-223ENST00000474643 ARPP19P56211 112 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 NAB2Q15742 525 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 UPP1Q16831 310 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 AXDND1Q5T1B0 1012 aaPredicted RBP16.5■□□□□ 0.23
VARS-223ENST00000474643 LILRA6Q6PI73 481 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 RSAD2Q8WXG1 361 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 NXPE3Q969Y0 559 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 ZNF707Q96C28 371 aaPredicted RBP16.5■□□□□ 0.23
VARS-223ENST00000474643 SNX27Q96L92 541 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 SPATA32Q96LK8 384 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 MYADMQ96S97 322 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 BLOC1S4Q9NUP1 217 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 FAM86C1Q9NVL1 165 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 EPS15L1Q9UBC2 864 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 ZDHHC9Q9Y397 364 aa16.5■□□□□ 0.23
VARS-223ENST00000474643 PIEZO1Q92508 2521 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 H0Y858 1186 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 H7C4K7 107 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 K7ENM7 598 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 PRRG1O14668 218 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 HNRNPDLO14979 420 aaKnown RBP16.49■□□□□ 0.23
VARS-223ENST00000474643 GALR2O43603 387 aaPredicted RBP16.49■□□□□ 0.23
VARS-223ENST00000474643 LRG1P02750 347 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 MCM4P33991 863 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 LIG4P49917 911 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 MAPK7Q13164 816 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 SV2BQ7L1I2 683 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 MYCT1Q8N699 235 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 FAM13BQ9NYF5 915 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 MTRRQ9UBK8 725 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 ODF2LQ9ULJ1 636 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 CA14Q9ULX7 337 aa16.49■□□□□ 0.23
VARS-223ENST00000474643 ZFP37Q9Y6Q3 630 aaPredicted RBP16.49■□□□□ 0.23
VARS-223ENST00000474643 TULP1O00294 542 aaPredicted RBP16.48■□□□□ 0.23
VARS-223ENST00000474643 NARSO43776 548 aaKnown RBP16.48■□□□□ 0.23
VARS-223ENST00000474643 N4BP1O75113 896 aaKnown RBP16.48■□□□□ 0.23
VARS-223ENST00000474643 FGFR3P22607 806 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 HOXA9P31269 272 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 RPL9P32969 192 aaKnown RBP16.48■□□□□ 0.23
VARS-223ENST00000474643 BRCC3P46736 316 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 CLCN5P51795 746 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 PPP2R3AQ06190 1150 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 TCF15Q12870 199 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 RAB33AQ14088 237 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 ZPBP2Q6X784 338 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 MTSS1LQ765P7 747 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 TAS1R3Q7RTX0 852 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 RTP3Q9BQQ7 232 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 REEP2Q9BRK0 252 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 CNTN3Q9P232 1028 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 PCDHA7Q9UN72 937 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 MYO10Q9HD67 2058 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 KMT2EQ8IZD2 1858 aa16.48■□□□□ 0.23
VARS-223ENST00000474643 ADAM12O43184 909 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 XPOTO43592 962 aaKnown RBP16.47■□□□□ 0.23
VARS-223ENST00000474643 MAPTP10636 758 aaKnown RBP16.47■□□□□ 0.23
VARS-223ENST00000474643 SRFP11831 508 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 LAMP2P13473 410 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 SCP2P22307 547 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 KYAT1Q16773 422 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 UVSSAQ2YD98 709 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 PABPC1LQ4VXU2 614 aaKnown RBP16.47■□□□□ 0.23
VARS-223ENST00000474643 SEZ6Q53EL9 994 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 ARSHQ5FYA8 562 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 VARS2Q5ST30 1063 aaKnown RBP16.47■□□□□ 0.23
VARS-223ENST00000474643 DYMQ7RTS9 669 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 ELMOD1Q8N336 334 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 TMEM105Q8N8V8 129 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 TMEM161BQ8NDZ6 487 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 LRRC15Q8TF66 581 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 C18orf25Q96B23 403 aaPredicted RBP16.47■□□□□ 0.23
VARS-223ENST00000474643 DHX58Q96C10 678 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 FAM212AQ96EL1 285 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 ZBTB45Q96K62 511 aaPredicted RBP16.47■□□□□ 0.23
VARS-223ENST00000474643 NTPCRQ9BSD7 190 aaKnown RBP16.47■□□□□ 0.23
VARS-223ENST00000474643 PARVGQ9HBI0 331 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 PTPRHQ9HD43 1115 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 CHMP5Q9NZZ3 219 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 RCOR1Q9UKL0 485 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 CDH7Q9ULB5 785 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 BACE2Q9Y5Z0 518 aa16.47■□□□□ 0.23
VARS-223ENST00000474643 SYN3O14994 580 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 CLTAP09496 248 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 KCNE1P15382 129 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 PROZP22891 400 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 ABCD1P33897 745 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms