RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 CRACR2AQ9BSW2 395 aa11.15□□□□□ -0.62
COL12A1-206ENST00000474564 ZBED2Q9BTP6 218 aa11.15□□□□□ -0.62
COL12A1-206ENST00000474564 MTMR12Q9C0I1 747 aa11.15□□□□□ -0.62
COL12A1-206ENST00000474564 INTS2Q9H0H0 1204 aaKnown RBP11.15□□□□□ -0.62
COL12A1-206ENST00000474564 PLCB1Q9NQ66 1216 aa11.15□□□□□ -0.62
COL12A1-206ENST00000474564 FAM207AQ9NSI2 230 aaPredicted RBP11.15□□□□□ -0.62
COL12A1-206ENST00000474564 INPP5FQ9Y2H2 1132 aa11.15□□□□□ -0.62
COL12A1-206ENST00000474564 COQ4Q9Y3A0 265 aa11.15□□□□□ -0.62
COL12A1-206ENST00000474564 AKR1B15C9JRZ8 316 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-206ENST00000474564 HLA-DRAP01903 254 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 ITGB3P05106 788 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 NFICP08651 508 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 PON1P27169 355 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 MLH1P40692 756 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 TNNC1P63316 161 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 ZNF699Q32M78 642 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 SV2CQ496J9 727 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 CBWD6Q4V339 395 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 XKR4Q5GH76 650 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 FIGNQ5HY92 759 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 ZNF667Q5HYK9 610 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 CBWD3Q5JTY5 395 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 CBWD5Q5RIA9 395 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 LMBRD2Q68DH5 695 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-206ENST00000474564 TRIM65Q6PJ69 517 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 ALKAL1Q6UXT8 129 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 CCDC186Q7Z3E2 898 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 TMEM192Q8IY95 271 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 LRRC52Q8N7C0 313 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 CPLX3Q8WVH0 158 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 LPPQ93052 612 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 JAKMIP2Q96AA8 810 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 HPDLQ96IR7 371 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 RNF39Q9H2S5 420 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 CEP72Q9P209 647 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 APEX2Q9UBZ4 518 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 AGAP1Q9UPQ3 857 aa11.14□□□□□ -0.63
COL12A1-206ENST00000474564 A0A1W2PQJ5 194 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 TRAPPC3O43617 180 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 OFD1O75665 1012 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 UPP2O95045 317 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 ALDH2P05091 517 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 POLR2FP61218 127 aaKnown RBP11.13□□□□□ -0.63
COL12A1-206ENST00000474564 ZBED6P86452 979 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 TUSC3Q13454 348 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 GLRA4Q5JXX5 417 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 TDRD10Q5VZ19 366 aaKnown RBP11.13□□□□□ -0.63
COL12A1-206ENST00000474564 AGMOQ6ZNB7 445 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 C15orf39Q6ZRI6 1047 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 ZNF598Q86UK7 904 aaKnown RBP11.13□□□□□ -0.63
COL12A1-206ENST00000474564 RTN4RL1Q86UN2 441 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-206ENST00000474564 PPM1KQ8N3J5 372 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 OR5B17Q8NGF7 314 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 OR8K1Q8NGG5 319 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 HELQQ8TDG4 1101 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 TAS1R2Q8TE23 839 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 COLEC11Q9BWP8 271 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 UBE2TQ9NPD8 197 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-206ENST00000474564 FBXL5Q9UKA1 691 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 MYO6Q9UM54 1294 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 CAPN11Q9UMQ6 739 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 NUB1Q9Y5A7 615 aa11.13□□□□□ -0.63
COL12A1-206ENST00000474564 KIF4AO95239 1232 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 POMCP01189 267 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 ACRP10323 421 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 UCHL3P15374 230 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 SYN1P17600 705 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 SLC9A1P19634 815 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 POLR2BP30876 1174 aaKnown RBP11.12□□□□□ -0.63
COL12A1-206ENST00000474564 KRT9P35527 623 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 STAT1P42224 750 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 TAF6P49848 677 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 SCNN1GP51170 649 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 BPIFB4P59827 614 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 LRMPQ12912 555 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 RAPGEF1Q13905 1077 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 GPNMBQ14956 572 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 ZBTB6Q15916 424 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 EPC2Q52LR7 807 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 C1orf220Q5T0J3 134 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 SPOUT1Q5T280 376 aaKnown RBP11.12□□□□□ -0.63
COL12A1-206ENST00000474564 KLHDC7AQ5VTJ3 777 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 DCLRE1AQ6PJP8 1040 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 OTOP2Q7RTS6 562 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 VPS36Q86VN1 386 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 ZSCAN30Q86W11 494 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 METTL23Q86XA0 190 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 EFCAB13Q8IY85 973 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 LRRC43Q8N309 656 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 PLEKHO2Q8TD55 490 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 ZFP42Q96MM3 310 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 MMS19Q96T76 1030 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 STK33Q9BYT3 514 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 OSBPL7Q9BZF2 842 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 FAM124BQ9H5Z6 455 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-206ENST00000474564 AAASQ9NRG9 546 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 DNAJC12Q9UKB3 198 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 SIK3Q9Y2K2 1263 aa11.12□□□□□ -0.63
COL12A1-206ENST00000474564 BZW2Q9Y6E2 419 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms