RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 AUTS2Q8WXX7 1259 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 TTPALQ9BTX7 342 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 GPR62Q9BZJ7 368 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 UBE2ZQ9H832 354 aaPredicted RBP14.92□□□□□ -0.02
USF1-205ENST00000473969 IRAK3Q9Y616 596 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 TDRD15B5MCY1 1934 aaKnown RBP14.92□□□□□ -0.02
USF1-205ENST00000473969 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 F8W810 466 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 TGFB1I1O43294 461 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 EXOC3O60645 756 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 ADRB2P07550 413 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 KCNA5P22460 613 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 KLRC2P26717 231 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 MCM4P33991 863 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 HOXD13P35453 343 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 SOX4Q06945 474 aaPredicted RBP14.91□□□□□ -0.02
USF1-205ENST00000473969 PTPN14Q15678 1187 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 ELMSAN1Q6PJG2 1045 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 CRELD2Q6UXH1 353 aaPredicted RBP14.91□□□□□ -0.02
USF1-205ENST00000473969 TAS1R1Q7RTX1 841 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 BRSK2Q8IWQ3 736 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 RIN2Q8WYP3 895 aaPredicted RBP14.91□□□□□ -0.02
USF1-205ENST00000473969 VN1R3Q9BXE9 311 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 PRDM6Q9NQX0 595 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.91□□□□□ -0.02
USF1-205ENST00000473969 TUBGCP4Q9UGJ1 667 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 C2CD2Q9Y426 696 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 CHD7Q9P2D1 2997 aa14.91□□□□□ -0.02
USF1-205ENST00000473969 PDXKO00764 312 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 MEFVO15553 781 aaPredicted RBP14.9□□□□□ -0.02
USF1-205ENST00000473969 ADH1AP07327 375 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 GTF2F1P35269 517 aaKnown RBP eCLIP14.9□□□□□ -0.02
USF1-205ENST00000473969 TFAMQ00059 246 aaKnown RBP14.9□□□□□ -0.02
USF1-205ENST00000473969 DSG1Q02413 1049 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 ADAM15Q13444 863 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 STIM1Q13586 685 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 ZBTB6Q15916 424 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 SPATA1Q5VX52 437 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 LLGL2Q6P1M3 1020 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.9□□□□□ -0.02
USF1-205ENST00000473969 GPR65Q8IYL9 337 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 RDH13Q8NBN7 331 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 FNBP1Q96RU3 617 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 DPP3Q9NY33 737 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 MAPK8IP1Q9UQF2 711 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 FAM50BQ9Y247 325 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 PCDHA5Q9Y5H7 936 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 PLXNA4Q9HCM2 1894 aa14.9□□□□□ -0.02
USF1-205ENST00000473969 COL6A3P12111 3177 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.89□□□□□ -0.03
USF1-205ENST00000473969 ARHGEF37A1IGU5 675 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 CLASP2O75122 1294 aaKnown RBP14.89□□□□□ -0.03
USF1-205ENST00000473969 NFICP08651 508 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 TMEM191BP0C7N4 346 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 PAX3P23760 479 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 LRPAP1P30533 357 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 BRCC3P46736 316 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 SNRNP35Q16560 246 aaKnown RBP14.89□□□□□ -0.03
USF1-205ENST00000473969 ZNF658Q5TYW1 1059 aaPredicted RBP14.89□□□□□ -0.03
USF1-205ENST00000473969 KIAA0319Q5VV43 1072 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 DSTYKQ6XUX3 929 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 CLEC17AQ6ZS10 378 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 C12orf56Q8IXR9 622 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 RNF168Q8IYW5 571 aaPredicted RBP14.89□□□□□ -0.03
USF1-205ENST00000473969 GUF1Q8N442 669 aaKnown RBP14.89□□□□□ -0.03
USF1-205ENST00000473969 CASP10Q92851 521 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 ANKRD36BP1Q96IX9 119 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 KLHL5Q96PQ7 755 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 CHST7Q9NS84 486 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 DPP7Q9UHL4 492 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 FRMD4BQ9Y2L6 1034 aa14.89□□□□□ -0.03
USF1-205ENST00000473969 CDH23Q9H251 3354 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 SYN3O14994 580 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 LINC01565O15544 149 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 TNNC2P02585 160 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 CNPP09543 421 aaKnown RBP14.88□□□□□ -0.03
USF1-205ENST00000473969 RPL13P26373 211 aaKnown RBP14.88□□□□□ -0.03
USF1-205ENST00000473969 CTC1Q2NKJ3 1217 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 PUS10Q3MIT2 529 aaKnown RBP14.88□□□□□ -0.03
USF1-205ENST00000473969 ANKS3Q6ZW76 656 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 CBWD2Q8IUF1 395 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 ZSWIM2Q8NEG5 633 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 APPL2Q8NEU8 664 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 ERCC4Q92889 916 aaPredicted RBP14.88□□□□□ -0.03
USF1-205ENST00000473969 B3GALT6Q96L58 329 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 ASB2Q96Q27 587 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 TSG101Q99816 390 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 KCTD10Q9H3F6 313 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 RXFP1Q9HBX9 757 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 PDE11AQ9HCR9 933 aa14.88□□□□□ -0.03
USF1-205ENST00000473969 CITO14578 2027 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 H3BQ06 376 aaPredicted RBP14.87□□□□□ -0.03
USF1-205ENST00000473969 H7C4K7 107 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 I3L4J1 428 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 LILRB3O75022 631 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 EFEMP2O95967 443 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 NR3C1P04150 777 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 KRT19P08727 400 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 TNNI1P19237 187 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 FGFR3P22607 806 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms