RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 MRI1Q9BV20 369 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 BCO1Q9HAY6 547 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 USP25Q9UHP3 1055 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 NEU2Q9Y3R4 380 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 PNPLA7Q6ZV29 1317 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 PRSS38A1L453 326 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 SERINC4A6NH21 518 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 LINC00473A8K010 186 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 URI1O94763 535 aaPredicted RBP3.02□□□□□ -1.93
CCDC39-203ENST00000473854 TUBB4AP04350 444 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 ALOX15P16050 662 aaPredicted RBP3.02□□□□□ -1.93
CCDC39-203ENST00000473854 HYAL1Q12794 435 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 UBXN2BQ14CS0 331 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 TRMT2AQ8IZ69 625 aaKnown RBP3.02□□□□□ -1.93
CCDC39-203ENST00000473854 JMYQ8N9B5 988 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 OR7D4Q8NG98 312 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 ZNF496Q96IT1 587 aaPredicted RBP3.02□□□□□ -1.93
CCDC39-203ENST00000473854 ORAI3Q9BRQ5 295 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 VPS16Q9H269 839 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 PPP1R1BQ9UD71 204 aaPredicted RBP3.02□□□□□ -1.93
CCDC39-203ENST00000473854 ADAM21Q9UKJ8 722 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 CDY2AQ9Y6F7 541 aa3.02□□□□□ -1.93
CCDC39-203ENST00000473854 A0A1W2PS29 197 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 TTLL1O95922 423 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 RAP2AP10114 183 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 TCF3P15923 654 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 ATP2A2P16615 1042 aaKnown RBP3.01□□□□□ -1.93
CCDC39-203ENST00000473854 LSP1P33241 339 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 ZNF134P52741 427 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 PHC1P78364 1004 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 OCRLQ01968 901 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 TWIST1Q15672 202 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 TXNRD1Q16881 649 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 CFAP100Q494V2 611 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 TMEM119Q4V9L6 283 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 CDCA2Q69YH5 1023 aaPredicted RBP3.01□□□□□ -1.93
CCDC39-203ENST00000473854 MEPCEQ7L2J0 689 aaKnown RBP3.01□□□□□ -1.93
CCDC39-203ENST00000473854 CLNKQ7Z7G1 428 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 RASAL3Q86YV0 1011 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 ZNF610Q8N9Z0 462 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 TOR1AIP2Q8NFQ8 470 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 SH2D3AQ9BRG2 576 aa3.01□□□□□ -1.93
CCDC39-203ENST00000473854 ZBTB7CA1YPR0 619 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 FAM90A10PA6NDY2 464 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 TARM1B6A8C7 271 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 SOCS2O14508 198 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 OAZ2O95190 189 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 JMJD7P0C870 316 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 SCP2P22307 547 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 SCNN1BP51168 640 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 MANFP55145 182 aaKnown RBP3□□□□□ -1.93
CCDC39-203ENST00000473854 NXPH1P58417 271 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 RPS7P62081 194 aaKnown RBP3□□□□□ -1.93
CCDC39-203ENST00000473854 AFMIDQ63HM1 303 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 OTUD7BQ6GQQ9 843 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 FRMD7Q6ZUT3 714 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 MRPL10Q7Z7H8 261 aaKnown RBP3□□□□□ -1.93
CCDC39-203ENST00000473854 FITM2Q8N6M3 262 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 DEPDC7Q96QD5 511 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 UHRF1Q96T88 793 aaPredicted RBP3□□□□□ -1.93
CCDC39-203ENST00000473854 TMEM260Q9NX78 707 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 PPP2R3BQ9Y5P8 575 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 ATRNL1Q5VV63 1379 aa3□□□□□ -1.93
CCDC39-203ENST00000473854 PRAMEF33A0A0G2JMD5 474 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 EME2A4GXA9 379 aaPredicted RBP2.99□□□□□ -1.93
CCDC39-203ENST00000473854 GSG1L2A8MUP6 293 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 ADM5C9JUS6 153 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 ADCY6O43306 1168 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 PRAMEF10O60809 474 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 MPGP29372 298 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 ECHS1P30084 290 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 KPNA1P52294 538 aaPredicted RBP2.99□□□□□ -1.93
CCDC39-203ENST00000473854 ITIH3Q06033 890 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 ZNF460Q14592 562 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 TRIP6Q15654 476 aaKnown RBP2.99□□□□□ -1.93
CCDC39-203ENST00000473854 ZNF529Q6P280 563 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 SLC41A1Q8IVJ1 513 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 REPS2Q8NFH8 660 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 FBXO18Q8NFZ0 1043 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 PIGOQ8TEQ8 1089 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 MARS2Q96GW9 593 aaKnown RBP2.99□□□□□ -1.93
CCDC39-203ENST00000473854 PRSS22Q9GZN4 317 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 LANCL2Q9NS86 450 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 TMPRSS11EQ9UL52 423 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 SIK3Q9Y2K2 1263 aa2.99□□□□□ -1.93
CCDC39-203ENST00000473854 NOTCH4Q99466 2003 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 CCDC78A2IDD5 438 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 AKR1B10O60218 316 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 DNAJC8O75937 253 aaPredicted RBP2.98□□□□□ -1.93
CCDC39-203ENST00000473854 JTBO76095 146 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 RAPGEF3O95398 923 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 F2P00734 622 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 HNRNPCP07910 306 aaKnown RBP eCLIP2.98□□□□□ -1.93
CCDC39-203ENST00000473854 CHRM2P08172 466 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 ELFN1P0C7U0 828 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 CYP2D6P10635 497 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 CANXP27824 592 aaKnown RBP2.98□□□□□ -1.93
CCDC39-203ENST00000473854 CCT8P50990 548 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 SUPT20HL1Q3ZLR7 823 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 C2orf27AQ580R0 203 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms