RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 OBP2BQ9NPH6 170 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 DCP1AQ9NPI6 582 aaPredicted RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 CYP26B1Q9NR63 512 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 H2AFY2Q9P0M6 372 aaPredicted RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 DKK3Q9UBP4 350 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 B4GALT6Q9UBX8 382 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 CFAP45Q9UL16 551 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 PCDHGB4Q9UN71 923 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 PCDHA11Q9Y5I1 949 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 SPATA31A6Q5VVP1 1343 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 PRR36Q9H6K5 1346 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 A0A096LPE4 126 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 A0A1W2PPZ6 126 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 hCG_1807616A0A1W2PRN6 198 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 SOX1O00570 391 aaPredicted RBP6.56□□□□□ -1.36
RTF1-203ENST00000473214 TRIM38O00635 465 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 AP3D1O14617 1153 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 ZBTB43O43298 467 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 DNAJA2O60884 412 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 DTNBO60941 627 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 SRGAP2O75044 1071 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 STAM2O75886 525 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 SNX4O95219 450 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 ZSCAN22P10073 491 aaPredicted RBP6.56□□□□□ -1.36
RTF1-203ENST00000473214 MYF5P13349 255 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 TSHRP16473 764 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 IL11P20809 199 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 CDK8P49336 464 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 NLRP5P59047 1200 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 SATB1Q01826 763 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 TLE2Q04725 743 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 KCNB1Q14721 858 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 DLGAP5Q15398 846 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 PGS1Q32NB8 556 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 CDCP2Q5VXM1 449 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 VN1R5Q7Z5H4 357 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 ADAT2Q7Z6V5 191 aaKnown RBP6.56□□□□□ -1.36
RTF1-203ENST00000473214 SHISA5Q8N114 240 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 CRACR2BQ8N4Y2 399 aaPredicted RBP6.56□□□□□ -1.36
RTF1-203ENST00000473214 TMCO5AQ8N6Q1 288 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 TSPYL6Q8N831 410 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 C12orf50Q8NA57 414 aaPredicted RBP6.56□□□□□ -1.36
RTF1-203ENST00000473214 TGFBRAP1Q8WUH2 860 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 LMBR1Q8WVP7 490 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 CTNNBL1Q8WYA6 563 aaPredicted RBP6.56□□□□□ -1.36
RTF1-203ENST00000473214 MAML1Q92585 1016 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 MUL1Q969V5 352 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 NXPE3Q969Y0 559 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 FBXL18Q96ME1 805 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 OSBPL1AQ9BXW6 950 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 EDEM3Q9BZQ6 932 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 DNAI2Q9GZS0 605 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 NOL6Q9H6R4 1146 aaKnown RBP6.56□□□□□ -1.36
RTF1-203ENST00000473214 ZNF624Q9P2J8 865 aaPredicted RBP6.56□□□□□ -1.36
RTF1-203ENST00000473214 KLHL3Q9UH77 587 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 ITM2BQ9Y287 266 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 FGD6Q6ZV73 1430 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 CASKIN1Q8WXD9 1431 aa6.56□□□□□ -1.36
RTF1-203ENST00000473214 EP400Q96L91 3159 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 CCDC18Q5T9S5 1454 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 LRP5O75197 1615 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 LOC100289279A0A1B0GTE1 492 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 FAM95CA0A1B0GW59 222 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 LGALS16A8MUM7 142 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 H0YC42 278 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 AQP7O14520 342 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 APOL1O14791 398 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 SGSM2O43147 1006 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 KIF20AO95235 890 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 SLU7O95391 586 aaKnown RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 DLGAP3O95886 979 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 ALDH2P05091 517 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 SRGAP2BP0DMP2 458 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 PCP11498 1178 aaKnown RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 ITGB5P18084 799 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 PAMP19021 973 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 HOXD10P28358 340 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 ALDH3A2P51648 485 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 AGFG1P52594 562 aaKnown RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 CREMQ03060 361 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 LRMPQ12912 555 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 OASLQ15646 514 aaKnown RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 SHROOM1Q2M3G4 852 aaPredicted RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 C1orf141Q5JVX7 400 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 LIN54Q6MZP7 749 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 IL27RAQ6UWB1 636 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 USP53Q70EK8 1073 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 MTDHQ86UE4 582 aaKnown RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 MOGAT3Q86VF5 341 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 VSIG10LQ86VR7 867 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 COL23A1Q86Y22 540 aaPredicted RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 C2CD5Q86YS7 1000 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 CHST14Q8NCH0 376 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 BVESQ8NE79 360 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 CEP70Q8NHQ1 597 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 STK35Q8TDR2 534 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 ASAP3Q8TDY4 903 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 ANKRD49Q8WVL7 239 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 BSNDQ8WZ55 320 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms