RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SYCP3Q8IZU3 236 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 VPS52Q8N1B4 723 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 VN1R2Q8NFZ6 395 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 TMEM169Q96HH4 297 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 CCDC34Q96HJ3 373 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 TCF25Q9BQ70 676 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 FAM213AQ9BRX8 229 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 TMEM206Q9H813 350 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 AGPAT3Q9NRZ7 376 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 LMBRD1Q9NUN5 540 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 EXOC1Q9NV70 894 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 CLDND1Q9NY35 253 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 EXOC7Q9UPT5 735 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 UBE4BO95155 1302 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 C2orf71A6NGG8 1288 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 PPEF2O14830 753 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 PER2O15055 1255 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 NFICP08651 508 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 LTBRP36941 435 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 UBE2HP62256 183 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 DLX2Q07687 328 aaPredicted RBP14.26□□□□□ -0.13
TPM3-216ENST00000473036 PSMD2Q13200 908 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 KCNB1Q14721 858 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 SKOR2Q2VWA4 1001 aaPredicted RBP14.26□□□□□ -0.13
TPM3-216ENST00000473036 JADE1Q6IE81 842 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 HFE2Q6ZVN8 426 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 CBWD2Q8IUF1 395 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 GZF1Q9H116 711 aaPredicted RBP14.26□□□□□ -0.13
TPM3-216ENST00000473036 RPF1Q9H9Y2 349 aaKnown RBP14.26□□□□□ -0.13
TPM3-216ENST00000473036 PLEKHA5Q9HAU0 1116 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 TOPORSQ9NS56 1045 aaPredicted RBP14.26□□□□□ -0.13
TPM3-216ENST00000473036 HSPBP1Q9NZL4 362 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 MAPK8IP1Q9UQF2 711 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 PCDHA5Q9Y5H7 936 aa14.26□□□□□ -0.13
TPM3-216ENST00000473036 PTPRJQ12913 1337 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 FSD2A1L4K1 749 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 I3L4J1 428 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 GLP2RO95838 553 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 SOD2P04179 222 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 CTSAP10619 480 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 BMP6P22004 513 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 MCM4P33991 863 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 PTPN5P54829 565 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 KRT17Q04695 432 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 KCNC3Q14003 757 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 PTPN14Q15678 1187 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 KNOP1Q1ED39 458 aaKnown RBP14.25□□□□□ -0.13
TPM3-216ENST00000473036 KIAA0319Q5VV43 1072 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 KANK3Q6NY19 840 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 FUT10Q6P4F1 479 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 RBM23Q86U06 439 aaKnown RBP14.25□□□□□ -0.13
TPM3-216ENST00000473036 ELOA2Q8IYF1 753 aaPredicted RBP14.25□□□□□ -0.13
TPM3-216ENST00000473036 MRPL43Q8N983 215 aaKnown RBP14.25□□□□□ -0.13
TPM3-216ENST00000473036 FEZF2Q8TBJ5 459 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 EDAQ92838 391 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 CHST7Q9NS84 486 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 ADAM28Q9UKQ2 775 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 PLXNA3P51805 1871 aa14.25□□□□□ -0.13
TPM3-216ENST00000473036 MBTPS2O43462 519 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 EXTL3O43909 919 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 CXCL14O95715 111 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 MBD3O95983 291 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 BRCC3P46736 316 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 NRIP1P48552 1158 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 PPP2R3AQ06190 1150 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 KYAT1Q16773 422 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 RTP2Q5QGT7 225 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 ARMCX5Q6P1M9 558 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 EP400NLQ6ZTU2 488 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 STXBP4Q6ZWJ1 553 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 TMC7Q7Z402 723 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 BRSK2Q8IWQ3 736 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 CXorf38Q8TB03 319 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 PLEKHO2Q8TD55 490 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 FAM212AQ96EL1 285 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 KIF12Q96FN5 646 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 HERC2P3Q9BVR0 1158 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 COLEC11Q9BWP8 271 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 IRF2BPLQ9H1B7 796 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 ENTPD7Q9NQZ7 604 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 DMAC2Q9NW81 257 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 PUF60Q9UHX1 559 aaKnown RBP14.24□□□□□ -0.13
TPM3-216ENST00000473036 MAN1B1Q9UKM7 699 aa14.24□□□□□ -0.13
TPM3-216ENST00000473036 TMEM189-UBE2V1I3L0A0 370 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 PODXLO00592 558 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 TBX10O75333 385 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 TADA2AO75478 443 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 LRPAP1P30533 357 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 CYP2J2P51589 502 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 DUSP6Q16828 381 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 ZCWPW2Q504Y3 356 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 SPATA1Q5VX52 437 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 ISM2Q6H9L7 571 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 DCLRE1AQ6PJP8 1040 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 RNF135Q8IUD6 432 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 C12orf56Q8IXR9 622 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 GPD1LQ8N335 351 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 MICAL1Q8TDZ2 1067 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 IGFLR1Q9H665 355 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 PDE11AQ9HCR9 933 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms