RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 DNAJC25-GNG10A0A024R161 153 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 CYP2D7A0A087X1C5 515 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 PRKAB2O43741 272 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 UNC5CO95185 931 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 CD4P01730 458 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 PYGLP06737 847 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 C6orf222P0C671 652 aaPredicted RBP10.79□□□□□ -0.68
APTX-216ENST00000472896 EEF2P13639 858 aaKnown RBP10.79□□□□□ -0.68
APTX-216ENST00000472896 CST5P28325 142 aaPredicted RBP10.79□□□□□ -0.68
APTX-216ENST00000472896 ATP5DP30049 168 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 MCM7P33993 719 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 GNAQP50148 359 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 RAD23BP54727 409 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 LRRC63Q05C16 580 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 SEC23AQ15436 765 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 TRIM68Q6AZZ1 485 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 PSRC1Q6PGN9 363 aaPredicted RBP10.79□□□□□ -0.68
APTX-216ENST00000472896 MAMDC4Q6UXC1 1216 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 OTOP2Q7RTS6 562 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 RBBP8NLQ8NC74 664 aaPredicted RBP10.79□□□□□ -0.68
APTX-216ENST00000472896 ASAP3Q8TDY4 903 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 DNAJC9Q8WXX5 260 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 KHSRPQ92945 711 aaKnown RBP eCLIP10.79□□□□□ -0.686e-6■□□□□ 9.5
APTX-216ENST00000472896 IFT43Q96FT9 208 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 AK8Q96MA6 479 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 GLT1D1Q96MS3 346 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 SYT15Q9BQS2 421 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 CRNKL1Q9BZJ0 848 aaKnown RBP10.79□□□□□ -0.68
APTX-216ENST00000472896 UPF3AQ9H1J1 476 aaKnown RBP10.79□□□□□ -0.68
APTX-216ENST00000472896 ARHGEF10LQ9HCE6 1279 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 EPB41L4AQ9HCS5 686 aaPredicted RBP10.79□□□□□ -0.68
APTX-216ENST00000472896 PARP2Q9UGN5 583 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 PPP1R9AQ9ULJ8 1098 aa10.79□□□□□ -0.68
APTX-216ENST00000472896 REV3LO60673 3130 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 A8MUI8 341 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 DDAH1O94760 285 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 EYA4O95677 639 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 TPBGLP0DKB5 382 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 NPEPPSP55786 919 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 GJA9P57773 515 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 RNASE9P60153 205 aaKnown RBP10.78□□□□□ -0.68
APTX-216ENST00000472896 MTA1Q13330 715 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 GNASQ5JWF2 1037 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 CATIPQ7Z7H3 387 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 LCORLQ8N3X6 602 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 LRMDAQ9H2I8 198 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 AZI2Q9H6S1 392 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 PDP2Q9P2J9 529 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 ATXN10Q9UBB4 475 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 TMCO1Q9UM00 188 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 LRCH1Q9Y2L9 728 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 ATP8A1Q9Y2Q0 1164 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 BZW2Q9Y6E2 419 aaKnown RBP10.78□□□□□ -0.68
APTX-216ENST00000472896 V9GY48 417 aaPredicted RBP10.78□□□□□ -0.68
APTX-216ENST00000472896 CHD7Q9P2D1 2997 aa10.78□□□□□ -0.68
APTX-216ENST00000472896 A0A0A6YYK5 440 aaPredicted RBP10.77□□□□□ -0.68
APTX-216ENST00000472896 PEX11AO75192 247 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 PYGBP11216 843 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 CDK8P49336 464 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 CCL23P55773 120 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 BEX3Q00994 111 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 POU5F1Q01860 360 aaKnown RBP10.77□□□□□ -0.68
APTX-216ENST00000472896 SFSWAPQ12872 951 aaKnown RBP10.77□□□□□ -0.68
APTX-216ENST00000472896 DHX34Q14147 1143 aaKnown RBP10.77□□□□□ -0.68
APTX-216ENST00000472896 SPDYAQ5MJ70 313 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 FAM83BQ5T0W9 1011 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 DUPD1Q68J44 220 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 OR52E8Q6IFG1 317 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 PIK3AP1Q6ZUJ8 805 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 SLFN11Q7Z7L1 901 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 LCA5Q86VQ0 697 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 CMTR1Q8N1G2 835 aaKnown RBP10.77□□□□□ -0.68
APTX-216ENST00000472896 PCSK9Q8NBP7 692 aaKnown RBP10.77□□□□□ -0.68
APTX-216ENST00000472896 KCNV2Q8TDN2 545 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 ESR2Q92731 530 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 PLEKHG4BQ96PX9 1271 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 TSG101Q99816 390 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 TIPINQ9BVW5 301 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 TRIM9Q9C026 710 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 DDX47Q9H0S4 455 aaKnown RBP10.77□□□□□ -0.68
APTX-216ENST00000472896 C11orf16Q9NQ32 467 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.77□□□□□ -0.68
APTX-216ENST00000472896 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.77□□□□□ -0.68
APTX-216ENST00000472896 KLHL14Q9P2G3 628 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 LARSQ9P2J5 1176 aaKnown RBP10.77□□□□□ -0.68
APTX-216ENST00000472896 RASAL2Q9UJF2 1139 aa10.77□□□□□ -0.68
APTX-216ENST00000472896 PVALEFA0A1B0GWK0 134 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 GSG1L2A8MUP6 293 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 ZSCAN9O15535 394 aaPredicted RBP10.77□□□□□ -0.69
APTX-216ENST00000472896 TTI1O43156 1089 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 TLL1O43897 1013 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 SKIP12755 728 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 RASSF2P50749 326 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 DNA2P51530 1060 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 ASIC2Q16515 512 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 TMTC3Q6ZXV5 915 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 GUF1Q8N442 669 aaKnown RBP10.77□□□□□ -0.69
APTX-216ENST00000472896 KIF2BQ8N4N8 673 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 METTL13Q8N6R0 699 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 LRRC57Q8N9N7 239 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms