RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 RWDD2AQ9UIY3 292 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 LZTS1Q9Y250 596 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 FNDC1Q4ZHG4 1894 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-205ENST00000472066 PODXLO00592 558 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 LPXNO60711 386 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 TADA2AO75478 443 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 LETM1O95202 739 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-205ENST00000472066 KIF4AO95239 1232 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 EFEMP2O95967 443 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 DLATP10515 647 aaKnown RBP13.34□□□□□ -0.27
PRKCB-205ENST00000472066 DNAJB1P25685 340 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 GUCY2FP51841 1108 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
PRKCB-205ENST00000472066 UBE3AQ05086 875 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 DUOXA2Q1HG44 320 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 CT47A1Q5JQC4 288 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-205ENST00000472066 CD300LGQ6UXG3 332 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 FILIP1Q7Z7B0 1213 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 DDX53Q86TM3 631 aaKnown RBP13.34□□□□□ -0.27
PRKCB-205ENST00000472066 WDR49Q8IV35 697 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 FAM186BQ8IYM0 893 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 TMC2Q8TDI7 906 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 PARD3BQ8TEW8 1205 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 POF1BQ8WVV4 589 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 MED15Q96RN5 788 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 CDX2Q99626 313 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-205ENST00000472066 MKNK1Q9BUB5 465 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 INTS13Q9NVM9 706 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 DPP3Q9NY33 737 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 SZT2Q5T011 3432 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 PTPRJQ12913 1337 aa13.34□□□□□ -0.27
PRKCB-205ENST00000472066 GBF1Q92538 1859 aa13.33□□□□□ -0.27
PRKCB-205ENST00000472066 ANO9A1A5B4 782 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 TMEM189-UBE2V1I3L0A0 370 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 B3GAT3O94766 335 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 TNNI1P19237 187 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 ERCC5P28715 1186 aaPredicted RBP13.33□□□□□ -0.28
PRKCB-205ENST00000472066 MCCD1P59942 119 aaPredicted RBP13.33□□□□□ -0.28
PRKCB-205ENST00000472066 DLG4P78352 724 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 CLDN10P78369 228 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 CAMK1Q14012 370 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 ADGRE1Q14246 886 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 C9orf57Q5W0N0 161 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 LMBRD2Q68DH5 695 aaPredicted RBP13.33□□□□□ -0.28
PRKCB-205ENST00000472066 INTS8Q75QN2 995 aaKnown RBP13.33□□□□□ -0.28
PRKCB-205ENST00000472066 CSGALNACT2Q8N6G5 542 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 C3orf58Q8NDZ4 430 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 OR5B17Q8NGF7 314 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 HASPINQ8TF76 798 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 ZNF516Q92618 1163 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 BORCS6Q96GS4 357 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 FAM84AQ96KN4 292 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 CEP63Q96MT8 703 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 GUCD1Q96NT3 240 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 CGRRF1Q99675 332 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 VN1R3Q9BXE9 311 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 SRRTQ9BXP5 876 aaKnown RBP13.33□□□□□ -0.28
PRKCB-205ENST00000472066 LMAN2LQ9H0V9 348 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 ANO10Q9NW15 660 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 STK39Q9UEW8 545 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 ADAM28Q9UKQ2 775 aa13.33□□□□□ -0.28
PRKCB-205ENST00000472066 LRRIQ3A6PVS8 624 aaPredicted RBP13.32□□□□□ -0.28
PRKCB-205ENST00000472066 PIRO00625 290 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 SLC16A3O15427 465 aaKnown RBP13.32□□□□□ -0.28
PRKCB-205ENST00000472066 TNNC2P02585 160 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 TMEM191BP0C7N4 346 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 EPB41P11171 864 aaKnown RBP13.32□□□□□ -0.28
PRKCB-205ENST00000472066 KRT13P13646 458 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 POU3F3P20264 500 aaPredicted RBP13.32□□□□□ -0.28
PRKCB-205ENST00000472066 VAMP7P51809 220 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 ERVFC1P60507 584 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 ENPEPQ07075 957 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 STX1AQ16623 288 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 C1orf220Q5T0J3 134 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 TAS1R1Q7RTX1 841 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 RNF168Q8IYW5 571 aaPredicted RBP13.32□□□□□ -0.28
PRKCB-205ENST00000472066 VPS52Q8N1B4 723 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 C1orf127Q8N9H9 656 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 CXorf38Q8TB03 319 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 MYLIPQ8WY64 445 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 MRPL38Q96DV4 380 aaKnown RBP13.32□□□□□ -0.28
PRKCB-205ENST00000472066 ANKRD36BP1Q96IX9 119 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 GAS2L1Q99501 681 aaPredicted RBP13.32□□□□□ -0.28
PRKCB-205ENST00000472066 GPR62Q9BZJ7 368 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 LMCD1Q9NZU5 365 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 CDH23Q9H251 3354 aa13.32□□□□□ -0.28
PRKCB-205ENST00000472066 PPEF2O14830 753 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 IKBKBO14920 756 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 FGFR1OPO95684 399 aaKnown RBP13.31□□□□□ -0.28
PRKCB-205ENST00000472066 ITGB3P05106 788 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 IGFBP4P22692 258 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 BRCC3P46736 316 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 AP3M2P53677 418 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 TYRO3Q06418 890 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 BFSP1Q12934 665 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 PTPROQ16827 1216 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 SCARA3Q6AZY7 606 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 FUT10Q6P4F1 479 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 TRAPPC11Q7Z392 1133 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms