RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 NIPA1Q7RTP0 329 aa12.98□□□□□ -0.33
IRF1-208ENST00000472045 RFFLQ8WZ73 363 aa12.98□□□□□ -0.33
IRF1-208ENST00000472045 MRPS31Q92665 395 aaKnown RBP12.98□□□□□ -0.33
IRF1-208ENST00000472045 L3MBTL3Q96JM7 780 aaPredicted RBP12.98□□□□□ -0.33
IRF1-208ENST00000472045 RABEP2Q9H5N1 569 aa12.98□□□□□ -0.33
IRF1-208ENST00000472045 GOLGA8KD6RF30 607 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 P4HA2O15460 535 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 ZNF189O75820 626 aaPredicted RBP12.97□□□□□ -0.33
IRF1-208ENST00000472045 DEUP1Q05D60 604 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 DHX9Q08211 1270 aaKnown RBP12.97□□□□□ -0.33
IRF1-208ENST00000472045 CPA5Q8WXQ8 436 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.97□□□□□ -0.33
IRF1-208ENST00000472045 KLRG1Q96E93 195 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 CABS1Q96KC9 395 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 FAM8A1Q9UBU6 413 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 F5H423 210 aaPredicted RBP12.97□□□□□ -0.33
IRF1-208ENST00000472045 EGFRP00533 1210 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 MMS22LQ6ZRQ5 1243 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 CAPNS2Q96L46 248 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 HTATIP2Q9BUP3 242 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 MID2Q9UJV3 735 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 DSEQ9UL01 958 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 COL14A1Q05707 1796 aaKnown RBP12.97□□□□□ -0.33
IRF1-208ENST00000472045 EXOC1LA0A1B0GW35 172 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 EPHB4P54760 987 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 AMHR2Q16671 573 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 TAF1BQ53T94 588 aaPredicted RBP12.97□□□□□ -0.33
IRF1-208ENST00000472045 ZNF280DQ6N043 979 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 FRA10AC1Q70Z53 315 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 SLC7A14Q8TBB6 771 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 ARHGEF2Q92974 986 aaKnown RBP12.97□□□□□ -0.33
IRF1-208ENST00000472045 WNT8AQ9H1J5 351 aa12.97□□□□□ -0.33
IRF1-208ENST00000472045 SUDS3Q9H7L9 328 aaPredicted RBP12.97□□□□□ -0.33
IRF1-208ENST00000472045 LIMA1Q9UHB6 759 aaKnown RBP12.97□□□□□ -0.33
IRF1-208ENST00000472045 SLIT3O75094 1523 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 PODXLO00592 558 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 CYB561D2O14569 222 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 DNAJB2P25686 324 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 IL31Q6EBC2 164 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 RABGGTAQ92696 567 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 PI4K2AQ9BTU6 479 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 PCDHB2Q9Y5E7 798 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 TRPV2Q9Y5S1 764 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
IRF1-208ENST00000472045 EFHC1Q5JVL4 640 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 JADE1Q6IE81 842 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 CHSY1Q86X52 802 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 TRIM42Q8IWZ5 723 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 PPFIBP2Q8ND30 876 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 SLC30A5Q8TAD4 765 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 UBA3Q8TBC4 463 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 EXT2Q93063 718 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 MKL1Q969V6 931 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 MRC1P22897 1456 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 UCHL3P15374 230 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 RPL10AP62906 217 aaKnown RBP12.96□□□□□ -0.33
IRF1-208ENST00000472045 ANKS1AQ92625 1134 aa12.96□□□□□ -0.33
IRF1-208ENST00000472045 DDX27Q96GQ7 796 aaKnown RBP12.96□□□□□ -0.33
IRF1-208ENST00000472045 DBR1Q9UK59 544 aaKnown RBP12.96□□□□□ -0.33
IRF1-208ENST00000472045 STX1BP61266 288 aa12.96□□□□□ -0.34
IRF1-208ENST00000472045 PRAMEP78395 509 aa12.96□□□□□ -0.34
IRF1-208ENST00000472045 NR1H3Q13133 447 aa12.96□□□□□ -0.34
IRF1-208ENST00000472045 HASPINQ8TF76 798 aa12.96□□□□□ -0.34
IRF1-208ENST00000472045 KCNB2Q92953 911 aa12.96□□□□□ -0.34
IRF1-208ENST00000472045 DNAJC17Q9NVM6 304 aaKnown RBP12.96□□□□□ -0.34
IRF1-208ENST00000472045 KLHL14Q9P2G3 628 aa12.96□□□□□ -0.34
IRF1-208ENST00000472045 ZMYND10O75800 440 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 ZNF211Q13398 564 aaPredicted RBP12.95□□□□□ -0.34
IRF1-208ENST00000472045 GPAT2Q6NUI2 795 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 CXCL17Q6UXB2 119 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 TAS2R42Q7RTR8 314 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 PID1Q7Z2X4 250 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 SCG3Q8WXD2 468 aaKnown RBP12.95□□□□□ -0.34
IRF1-208ENST00000472045 FMO2Q99518 471 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 MRPL9Q9BYD2 267 aaKnown RBP12.95□□□□□ -0.34
IRF1-208ENST00000472045 BFARQ9NZS9 450 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 SLC4A7Q9Y6M7 1214 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 RIC1Q4ADV7 1423 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
IRF1-208ENST00000472045 GARTP22102 1010 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 GTF2H1P32780 548 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 DCAF6Q58WW2 860 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 RNF10Q8N5U6 811 aaKnown RBP12.95□□□□□ -0.34
IRF1-208ENST00000472045 MTMR12Q9C0I1 747 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 CAPN11Q9UMQ6 739 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 CSDE1O75534 798 aaKnown RBP12.95□□□□□ -0.34
IRF1-208ENST00000472045 GRAP2O75791 330 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 AP1G2O75843 785 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 PGK1P00558 417 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 LGALS2P05162 132 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 SLC1A1P43005 524 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 IL9RQ01113 521 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 IKBKEQ14164 716 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 ATPAF2Q8N5M1 289 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 SARS2Q9NP81 518 aaKnown RBP12.95□□□□□ -0.34
IRF1-208ENST00000472045 SAYSD1Q9NPB0 183 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 E5RI56 91 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 NCAM1P13591 858 aa12.95□□□□□ -0.34
IRF1-208ENST00000472045 TMEM199Q8N511 208 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms