RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 TLK1Q9UKI8 766 aa6.43□□□□□ -1.38
CD46-213ENST00000471987 MTO1Q9Y2Z2 717 aaKnown RBP6.43□□□□□ -1.38
CD46-213ENST00000471987 K7ESF4 209 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 PRSS23O95084 383 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 ERVK-21P61565 698 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 MTM1Q13496 603 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 ATP2B3Q16720 1220 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 AMOTL1Q8IY63 956 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 FITM2Q8N6M3 262 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 ATL2Q8NHH9 583 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 COG1Q8WTW3 980 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 NUP133Q8WUM0 1156 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 C7orf25Q9BPX7 421 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 RSAD1Q9HA92 442 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 ADARB2Q9NS39 739 aaKnown RBP6.42□□□□□ -1.38
CD46-213ENST00000471987 USP25Q9UHP3 1055 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 RUVBL1Q9Y265 456 aaKnown RBP6.42□□□□□ -1.38
CD46-213ENST00000471987 PRKAB1Q9Y478 270 aa6.42□□□□□ -1.38
CD46-213ENST00000471987 MYADML2A6NDP7 307 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 AMY1AP04745 511 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 DDCP20711 480 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 AGXTP21549 392 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 CREMQ03060 361 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 ZNF169Q14929 603 aaPredicted RBP6.41□□□□□ -1.38
CD46-213ENST00000471987 CYP2A13Q16696 494 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 COLGALT2Q8IYK4 626 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.41□□□□□ -1.38
CD46-213ENST00000471987 OR2I1PQ8NGU4 316 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 SSH1Q8WYL5 1049 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 NACC2Q96BF6 587 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 MED15Q96RN5 788 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 PNKPQ96T60 521 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 DUSP26Q9BV47 211 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 GSTO2Q9H4Y5 243 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 ZNF277Q9NRM2 450 aaPredicted RBP6.41□□□□□ -1.38
CD46-213ENST00000471987 DMTF1Q9Y222 760 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 TNFRSF18Q9Y5U5 241 aa6.41□□□□□ -1.38
CD46-213ENST00000471987 CCDC78A2IDD5 438 aa6.4□□□□□ -1.38
CD46-213ENST00000471987 ERN1O75460 977 aaKnown RBP6.4□□□□□ -1.38
CD46-213ENST00000471987 VAV2P52735 878 aa6.4□□□□□ -1.38
CD46-213ENST00000471987 ATP8B2P98198 1209 aa6.4□□□□□ -1.38
CD46-213ENST00000471987 KLF1Q13351 362 aaPredicted RBP6.4□□□□□ -1.38
CD46-213ENST00000471987 BOLLQ8N9W6 283 aaKnown RBP6.4□□□□□ -1.38
CD46-213ENST00000471987 NLGN4YQ8NFZ3 816 aaPredicted RBP6.4□□□□□ -1.38
CD46-213ENST00000471987 MARS2Q96GW9 593 aaKnown RBP6.4□□□□□ -1.38
CD46-213ENST00000471987 SLC2A13Q96QE2 648 aa6.4□□□□□ -1.38
CD46-213ENST00000471987 AIFM2Q9BRQ8 373 aa6.4□□□□□ -1.38
CD46-213ENST00000471987 ALG13Q9NP73 1137 aaKnown RBP6.4□□□□□ -1.38
CD46-213ENST00000471987 LRIT1Q9P2V4 623 aa6.4□□□□□ -1.38
CD46-213ENST00000471987 MYBBP1AQ9BQG0 1328 aaKnown RBP6.4□□□□□ -1.39
CD46-213ENST00000471987 SALL3Q9BXA9 1300 aa6.4□□□□□ -1.39
CD46-213ENST00000471987 PTH2RP49190 550 aa6.39□□□□□ -1.39
CD46-213ENST00000471987 SIM1P81133 766 aaPredicted RBP6.39□□□□□ -1.39
CD46-213ENST00000471987 MRPS35P82673 323 aaKnown RBP6.39□□□□□ -1.39
CD46-213ENST00000471987 DACT2Q5SW24 774 aa6.39□□□□□ -1.39
CD46-213ENST00000471987 ZGPATQ8N5A5 531 aaKnown RBP6.39□□□□□ -1.39
CD46-213ENST00000471987 FAM98AQ8NCA5 519 aaKnown RBP6.39□□□□□ -1.39
CD46-213ENST00000471987 PTCD3Q96EY7 689 aaKnown RBP6.39□□□□□ -1.39
CD46-213ENST00000471987 UNKLQ9H9P5 680 aaKnown RBP6.39□□□□□ -1.39
CD46-213ENST00000471987 KIAA1586Q9HCI6 787 aa6.39□□□□□ -1.39
CD46-213ENST00000471987 SAP30BPQ9UHR5 308 aaKnown RBP6.39□□□□□ -1.39
CD46-213ENST00000471987 TCRBV7S2A1N4TA0A589 114 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 CDHR4A6H8M9 788 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 TRIM75PA6NK02 468 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 KIAA0391O15091 583 aaKnown RBP6.38□□□□□ -1.39
CD46-213ENST00000471987 IL12RB1P42701 662 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 WASP42768 502 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 RARRES1P49788 294 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 NOMO3P69849 1222 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 NOMO2Q5JPE7 1267 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 RHOT1Q8IXI2 618 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 LNX2Q8N448 690 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 TBC1D15Q8TC07 691 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 DPF2Q92785 391 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 SPATA5L1Q9BVQ7 753 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 C11orf54Q9H0W9 315 aaPredicted RBP6.38□□□□□ -1.39
CD46-213ENST00000471987 KCTD5Q9NXV2 234 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 INTUQ9ULD6 942 aa6.38□□□□□ -1.39
CD46-213ENST00000471987 COL11A2P13942 1736 aaPredicted RBP6.37□□□□□ -1.39
CD46-213ENST00000471987 PHLDB1Q86UU1 1377 aa6.37□□□□□ -1.39
CD46-213ENST00000471987 C1RP00736 705 aa6.37□□□□□ -1.39
CD46-213ENST00000471987 ZNF37AP17032 561 aaPredicted RBP6.37□□□□□ -1.39
CD46-213ENST00000471987 CTXN1P60606 82 aa6.37□□□□□ -1.39
CD46-213ENST00000471987 CLUL1Q15846 466 aa6.37□□□□□ -1.39
CD46-213ENST00000471987 PPM1NQ8N819 430 aa6.37□□□□□ -1.39
CD46-213ENST00000471987 ACTRT2Q8TDY3 377 aa6.37□□□□□ -1.39
CD46-213ENST00000471987 NRG4Q8WWG1 115 aa6.37□□□□□ -1.39
CD46-213ENST00000471987 LRFN3Q9BTN0 628 aa6.37□□□□□ -1.39
CD46-213ENST00000471987 HSFX1Q9UBD0 423 aa6.37□□□□□ -1.39
CD46-213ENST00000471987 MCM8Q9UJA3 840 aa6.37□□□□□ -1.39
CD46-213ENST00000471987 HAUS5O94927 633 aa6.36□□□□□ -1.39
CD46-213ENST00000471987 LMO1P25800 156 aa6.36□□□□□ -1.39
CD46-213ENST00000471987 GEN1Q17RS7 908 aa6.36□□□□□ -1.39
CD46-213ENST00000471987 COLEC12Q5KU26 742 aa6.36□□□□□ -1.39
CD46-213ENST00000471987 SP5Q6BEB4 398 aaPredicted RBP6.36□□□□□ -1.39
CD46-213ENST00000471987 PUS7LQ9H0K6 701 aaKnown RBP6.36□□□□□ -1.39
CD46-213ENST00000471987 FOXJ2Q9P0K8 574 aa6.36□□□□□ -1.39
CD46-213ENST00000471987 TRGV11A0A075B6L2 103 aa6.35□□□□□ -1.39
CD46-213ENST00000471987 IGLV2-14P01704 120 aa6.35□□□□□ -1.39
CD46-213ENST00000471987 POU3F3P20264 500 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms