RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 C11orf63Q6NUN7 778 aa18.6■□□□□ 0.57
RRP1-202ENST00000471909 CCDC62Q6P9F0 684 aa18.6■□□□□ 0.57
RRP1-202ENST00000471909 ARMC9Q7Z3E5 817 aa18.6■□□□□ 0.57
RRP1-202ENST00000471909 ALG3Q92685 438 aa18.6■□□□□ 0.57
RRP1-202ENST00000471909 SART1O43290 800 aaKnown RBP18.59■□□□□ 0.57
RRP1-202ENST00000471909 IFT88Q13099 833 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 LDLRAD1Q5T700 205 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 SPOPLQ6IQ16 392 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 COPS5Q92905 334 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 DDX47Q9H0S4 455 aaKnown RBP18.59■□□□□ 0.57
RRP1-202ENST00000471909 CARD9Q9H257 536 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 MROH8Q9H579 483 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 TMBIM4Q9HC24 238 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 CNTNAP2Q9UHC6 1331 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 SIP14410 1827 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 MTA2O94776 668 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 FGGP02679 453 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 MYZAPP0CAP1 466 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 PIK3CAP42336 1068 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 ERVK-9P63128 1117 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 ACTN3Q08043 901 aaPredicted RBP18.59■□□□□ 0.57
RRP1-202ENST00000471909 BIRC3Q13489 604 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 EAPPQ56P03 285 aaPredicted RBP18.59■□□□□ 0.57
RRP1-202ENST00000471909 WDR44Q5JSH3 913 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 IER5Q5VY09 327 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 LRIG3Q6UXM1 1119 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 PLPPR4Q7Z2D5 763 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 DHX37Q8IY37 1157 aaKnown RBP18.59■□□□□ 0.57
RRP1-202ENST00000471909 ATP8B4Q8TF62 1192 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 SPATA33Q96N06 139 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 PPME1Q9Y570 386 aa18.59■□□□□ 0.57
RRP1-202ENST00000471909 CCDC188H7C350 402 aa18.58■□□□□ 0.57
RRP1-202ENST00000471909 MSCO60682 206 aa18.58■□□□□ 0.57
RRP1-202ENST00000471909 CYP1A2P05177 515 aa18.58■□□□□ 0.57
RRP1-202ENST00000471909 CYP2C8P10632 490 aa18.58■□□□□ 0.57
RRP1-202ENST00000471909 HARSP12081 509 aaKnown RBP18.58■□□□□ 0.57
RRP1-202ENST00000471909 LAMTOR4Q0VGL1 99 aa18.58■□□□□ 0.57
RRP1-202ENST00000471909 PLCB4Q15147 1175 aa18.58■□□□□ 0.57
RRP1-202ENST00000471909 LRRC71Q8N4P6 559 aa18.58■□□□□ 0.57
RRP1-202ENST00000471909 MORC4Q8TE76 937 aa18.58■□□□□ 0.57
RRP1-202ENST00000471909 FAM81BQ96LP2 452 aa18.58■□□□□ 0.57
RRP1-202ENST00000471909 CCDC113Q9H0I3 377 aa18.58■□□□□ 0.57
RRP1-202ENST00000471909 PPANQ9NQ55 473 aaKnown RBP18.58■□□□□ 0.57
RRP1-202ENST00000471909 PDGFCQ9NRA1 345 aa18.58■□□□□ 0.57
RRP1-202ENST00000471909 DIS3Q9Y2L1 958 aaKnown RBP18.58■□□□□ 0.57
RRP1-202ENST00000471909 IGKV6-21A0A0C4DH24 114 aa18.58■□□□□ 0.56
RRP1-202ENST00000471909 SRGAP2CP0DJJ0 459 aa18.58■□□□□ 0.56
RRP1-202ENST00000471909 ZPBP2Q6X784 338 aa18.58■□□□□ 0.56
RRP1-202ENST00000471909 EIF1ADQ8N9N8 165 aaKnown RBP18.58■□□□□ 0.56
RRP1-202ENST00000471909 OR5B17Q8NGF7 314 aa18.58■□□□□ 0.56
RRP1-202ENST00000471909 CGRRF1Q99675 332 aa18.58■□□□□ 0.56
RRP1-202ENST00000471909 APOBEC3GQ9HC16 384 aaKnown RBP18.58■□□□□ 0.56
RRP1-202ENST00000471909 NR2E1Q9Y466 385 aa18.58■□□□□ 0.56
RRP1-202ENST00000471909 TMEM110-MUSTN1A8MSY1 372 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 CLDN3O15551 220 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 EFNA5P52803 228 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 ZNF211Q13398 564 aaPredicted RBP18.57■□□□□ 0.56
RRP1-202ENST00000471909 SNAPC2Q13487 334 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 CUL1Q13616 776 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 MESDQ14696 234 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 CDCA2Q69YH5 1023 aaPredicted RBP18.57■□□□□ 0.56
RRP1-202ENST00000471909 ACAD10Q6JQN1 1059 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 CCDC13Q8IYE1 715 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 ZNF653Q96CK0 615 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 CYFIP2Q96F07 1278 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 JPH2Q9BR39 696 aaPredicted RBP18.57■□□□□ 0.56
RRP1-202ENST00000471909 GTF3C4Q9UKN8 822 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 FAM189A1O60320 539 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 TXNP10599 105 aaKnown RBP18.57■□□□□ 0.56
RRP1-202ENST00000471909 HSD17B3P37058 310 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 CLEC16AQ2KHT3 1053 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 RNF149Q8NC42 400 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 KRT35Q92764 455 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 LRRC45Q96CN5 670 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 NUP85Q9BW27 656 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 CXorf56Q9H5V9 222 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 TRPC6Q9Y210 931 aa18.57■□□□□ 0.56
RRP1-202ENST00000471909 ACO1P21399 889 aaKnown RBP18.56■□□□□ 0.56
RRP1-202ENST00000471909 COMTP21964 271 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 TNFSF9P41273 254 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 MARCKSL1P49006 195 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 SCARA3Q6AZY7 606 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 CCDC121Q6ZUS5 278 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 ZNF564Q8TBZ8 553 aaPredicted RBP18.56■□□□□ 0.56
RRP1-202ENST00000471909 TRAPPC12Q8WVT3 735 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 BTBD6Q96KE9 485 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 AMACRQ9UHK6 382 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 MIF4GDA9UHW6 222 aaKnown RBP18.56■□□□□ 0.56
RRP1-202ENST00000471909 RDXP35241 583 aaKnown RBP18.56■□□□□ 0.56
RRP1-202ENST00000471909 MXD4Q14582 209 aaPredicted RBP18.56■□□□□ 0.56
RRP1-202ENST00000471909 KCTD19Q17RG1 926 aaPredicted RBP18.56■□□□□ 0.56
RRP1-202ENST00000471909 ZBTB33Q86T24 672 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 TCP11Q8WWU5 503 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 SLC10A4Q96EP9 437 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 RPS6KC1Q96S38 1066 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 MRPL4Q9BYD3 311 aaKnown RBP18.56■□□□□ 0.56
RRP1-202ENST00000471909 KLC4Q9NSK0 619 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 PCDHB2Q9Y5E7 798 aa18.56■□□□□ 0.56
RRP1-202ENST00000471909 BHMG1C9JSJ3 638 aaPredicted RBP18.55■□□□□ 0.56
RRP1-202ENST00000471909 CHUKO15111 745 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms