RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 KCNG1Q9UIX4 513 aa20.58■□□□□ 0.89
COMMD1-207ENST00000471704 NOTCH4Q99466 2003 aa20.58■□□□□ 0.88
COMMD1-207ENST00000471704 MYO15AQ9UKN7 3530 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 ANHXE9PGG2 379 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 NARSO43776 548 aaKnown RBP20.57■□□□□ 0.88
COMMD1-207ENST00000471704 FAM189A1O60320 539 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 B3GAT3O94766 335 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 FAM13AO94988 1023 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 HNRNPA1P09651 372 aaKnown RBP eCLIP20.57■□□□□ 0.88
COMMD1-207ENST00000471704 KCNE1P15382 129 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 NASPP49321 788 aaPredicted RBP20.57■□□□□ 0.88
COMMD1-207ENST00000471704 YARSP54577 528 aaKnown RBP20.57■□□□□ 0.88
COMMD1-207ENST00000471704 SLC39A14Q15043 492 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 SLC39A4Q6P5W5 647 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 MYCT1Q8N699 235 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 C18orf25Q96B23 403 aaPredicted RBP20.57■□□□□ 0.88
COMMD1-207ENST00000471704 ACAP3Q96P50 834 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 MFSD1Q9H3U5 465 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 ZSCAN16Q9H4T2 348 aaPredicted RBP20.57■□□□□ 0.88
COMMD1-207ENST00000471704 PARVGQ9HBI0 331 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 TOPORSQ9NS56 1045 aaPredicted RBP20.57■□□□□ 0.88
COMMD1-207ENST00000471704 FAM86C1Q9NVL1 165 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 TBX20Q9UMR3 447 aa20.57■□□□□ 0.88
COMMD1-207ENST00000471704 CFAP54Q96N23 3096 aa20.56■□□□□ 0.88
COMMD1-207ENST00000471704 H0Y858 1186 aa20.56■□□□□ 0.88
COMMD1-207ENST00000471704 K7ENM7 598 aa20.56■□□□□ 0.88
COMMD1-207ENST00000471704 TRAK2O60296 914 aa20.56■□□□□ 0.88
COMMD1-207ENST00000471704 PIGRP01833 764 aa20.56■□□□□ 0.88
COMMD1-207ENST00000471704 NMT1P30419 496 aaKnown RBP20.56■□□□□ 0.88
COMMD1-207ENST00000471704 HOXA9P31269 272 aa20.56■□□□□ 0.88
COMMD1-207ENST00000471704 BRCC3P46736 316 aa20.56■□□□□ 0.88
COMMD1-207ENST00000471704 ZBTB41Q5SVQ8 909 aa20.56■□□□□ 0.88
COMMD1-207ENST00000471704 RSPO2Q6UXX9 243 aaPredicted RBP20.56■□□□□ 0.88
COMMD1-207ENST00000471704 ATOH1Q92858 354 aaPredicted RBP20.56■□□□□ 0.88
COMMD1-207ENST00000471704 MTRRQ9UBK8 725 aa20.56■□□□□ 0.88
COMMD1-207ENST00000471704 WNT16Q9UBV4 365 aa20.56■□□□□ 0.88
COMMD1-207ENST00000471704 BACE2Q9Y5Z0 518 aa20.56■□□□□ 0.88
COMMD1-207ENST00000471704 I3L4J1 428 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 CLDN3O15551 220 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 PI15O43692 258 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 C8AP07357 584 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 POU2F2P09086 479 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 AOC1P19801 751 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 OR1D2P34982 312 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 TNFSF9P41273 254 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 HTR4Q13639 388 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 LIN9Q5TKA1 542 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 DYMQ7RTS9 669 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 GRASPQ7Z6J2 395 aaPredicted RBP20.55■□□□□ 0.88
COMMD1-207ENST00000471704 SIX5Q8N196 739 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 DDX27Q96GQ7 796 aaKnown RBP20.55■□□□□ 0.88
COMMD1-207ENST00000471704 STK17AQ9UEE5 414 aa20.55■□□□□ 0.88
COMMD1-207ENST00000471704 ZFP37Q9Y6Q3 630 aaPredicted RBP20.55■□□□□ 0.88
COMMD1-207ENST00000471704 RIF1Q5UIP0 2472 aaKnown RBP20.55■□□□□ 0.88
COMMD1-207ENST00000471704 MYMKA6NI61 221 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 PROB1E7EW31 1015 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 H0YCG3 227 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 KRT18P05783 430 aaKnown RBP20.54■□□□□ 0.88
COMMD1-207ENST00000471704 CXCL8P10145 99 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 SRFP11831 508 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 FSHRP23945 695 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 TKTP29401 623 aaKnown RBP20.54■□□□□ 0.88
COMMD1-207ENST00000471704 GTF2BQ00403 316 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 UVSSAQ2YD98 709 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 ZC2HC1CQ53FD0 456 aaPredicted RBP20.54■□□□□ 0.88
COMMD1-207ENST00000471704 PPM1LQ5SGD2 360 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 AXDND1Q5T1B0 1012 aaPredicted RBP20.54■□□□□ 0.88
COMMD1-207ENST00000471704 RTL10Q7L3V2 364 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 GET4Q7L5D6 327 aaPredicted RBP20.54■□□□□ 0.88
COMMD1-207ENST00000471704 LINC00301Q8NCQ3 95 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 FLCNQ8NFG4 579 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 DNAJC19Q96DA6 116 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 BICD1Q96G01 975 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 IKZF4Q9H2S9 585 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 ZHX3Q9H4I2 956 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 SLC38A7Q9NVC3 462 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 TUBGCP4Q9UGJ1 667 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 FBXL21Q9UKT6 434 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 TSC2P49815 1807 aa20.54■□□□□ 0.88
COMMD1-207ENST00000471704 KRBA1A5PL33 1030 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 TISP43B9A030 160 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 PODXLO00592 558 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 TRAPPC3O43617 180 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 TBCAO75347 108 aaKnown RBP20.53■□□□□ 0.88
COMMD1-207ENST00000471704 LIG4P49917 911 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 NTHL1P78549 312 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 SPAG1Q07617 926 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 RRAGBQ5VZM2 374 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 SFR1Q86XK3 245 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 MAP4K3Q8IVH8 894 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 HSCBQ8IWL3 235 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 KRI1Q8N9T8 703 aaKnown RBP20.53■□□□□ 0.88
COMMD1-207ENST00000471704 DDX12PQ92771 950 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 TFIP11Q9UBB9 837 aaKnown RBP20.53■□□□□ 0.88
COMMD1-207ENST00000471704 CCDC39Q9UFE4 941 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 CDY1Q9Y6F8 540 aa20.53■□□□□ 0.88
COMMD1-207ENST00000471704 PTPRZ1P23471 2315 aaPredicted RBP20.53■□□□□ 0.88
COMMD1-207ENST00000471704 WDR87Q6ZQQ6 2873 aa20.52■□□□□ 0.88
COMMD1-207ENST00000471704 TTC26A0AVF1 554 aa20.52■□□□□ 0.88
COMMD1-207ENST00000471704 ANKRD63C9JTQ0 380 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms