RNA–Protein interactions for RNA: ENST00000471621.5

NELFCD-203, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-203ENST00000471621 C15orf39Q6ZRI6 1047 aa17.1■□□□□ 0.33
NELFCD-203ENST00000471621 C18orf25Q96B23 403 aaPredicted RBP17.1■□□□□ 0.33
NELFCD-203ENST00000471621 ZNF558Q96NG5 402 aa17.1■□□□□ 0.33
NELFCD-203ENST00000471621 PLVAPQ9BX97 442 aa17.1■□□□□ 0.33
NELFCD-203ENST00000471621 TMEM8AQ9HCN3 771 aa17.1■□□□□ 0.33
NELFCD-203ENST00000471621 STK39Q9UEW8 545 aa17.1■□□□□ 0.33
NELFCD-203ENST00000471621 PTPRSQ13332 1948 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 ANO9A1A5B4 782 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 LRRC10BA6NIK2 292 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 GOLGA6L19H0YKK7 550 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 ZC3H11AO75152 810 aaKnown RBP eCLIP17.09■□□□□ 0.33
NELFCD-203ENST00000471621 C4BPAP04003 597 aaKnown RBP17.09■□□□□ 0.33
NELFCD-203ENST00000471621 GALTP07902 379 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 TPM2P07951 284 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 PNPLA4P41247 253 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 BCAR1P56945 870 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 SOX4Q06945 474 aaPredicted RBP17.09■□□□□ 0.33
NELFCD-203ENST00000471621 MAN2A1Q16706 1144 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 UPP1Q16831 310 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 DCAF17Q5H9S7 520 aaPredicted RBP17.09■□□□□ 0.33
NELFCD-203ENST00000471621 TCERG1LQ5VWI1 586 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 KRT39Q6A163 491 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 DCLRE1AQ6PJP8 1040 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 KCNT2Q6UVM3 1135 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 TRAPPC11Q7Z392 1133 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 LRRC52Q8N7C0 313 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 C1orf127Q8N9H9 656 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 OR5B17Q8NGF7 314 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 ZNF516Q92618 1163 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 POP1Q99575 1024 aaKnown RBP17.09■□□□□ 0.33
NELFCD-203ENST00000471621 COLEC11Q9BWP8 271 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 MTMR12Q9C0I1 747 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 HSD3B7Q9H2F3 369 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 TUBGCP4Q9UGJ1 667 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 FAN1Q9Y2M0 1017 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 YBX2Q9Y2T7 364 aaKnown RBP17.09■□□□□ 0.33
NELFCD-203ENST00000471621 PCDHB12Q9Y5F1 795 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 PTPRJQ12913 1337 aa17.09■□□□□ 0.33
NELFCD-203ENST00000471621 TMEM265A0A087WTH1 108 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 LCHNA4D1U4 455 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 C5orf67F2Z3F1 127 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 PIRO00625 290 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 RB1P06400 928 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 CA3P07451 260 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 CDK11BP21127 795 aaKnown RBP17.08■□□□□ 0.32
NELFCD-203ENST00000471621 DNAJB2P25686 324 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 BMPR1AP36894 532 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 MTIF2P46199 727 aaKnown RBP17.08■□□□□ 0.32
NELFCD-203ENST00000471621 RBP5P82980 135 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 PPP3CAQ08209 521 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 CETN1Q12798 172 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 SPOUT1Q5T280 376 aaKnown RBP17.08■□□□□ 0.32
NELFCD-203ENST00000471621 C9orf57Q5W0N0 161 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 SV2AQ7L0J3 742 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 LUZP1Q86V48 1076 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 COLGALT1Q8NBJ5 622 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 CXorf38Q8TB03 319 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 TGS1Q96RS0 853 aaKnown RBP17.08■□□□□ 0.32
NELFCD-203ENST00000471621 TUBGCP2Q9BSJ2 902 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 SLC28A3Q9HAS3 691 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 DNAJB4Q9UDY4 337 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 LIMA1Q9UHB6 759 aaKnown RBP17.08■□□□□ 0.32
NELFCD-203ENST00000471621 COQ4Q9Y3A0 265 aa17.08■□□□□ 0.32
NELFCD-203ENST00000471621 R3HCC1Q9Y3T6 440 aaKnown RBP17.08■□□□□ 0.32
NELFCD-203ENST00000471621 FNDC1Q4ZHG4 1894 aaPredicted RBP17.07■□□□□ 0.32
NELFCD-203ENST00000471621 CEP290O15078 2479 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 CASTOR2A6NHX0 329 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 PODXLO00592 558 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 NRP1O14786 923 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 B4GALT3O60512 393 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 STAU1O95793 577 aaKnown RBP17.07■□□□□ 0.32
NELFCD-203ENST00000471621 AFPP02771 609 aaKnown RBP17.07■□□□□ 0.32
NELFCD-203ENST00000471621 TRIM49P0CI25 452 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 TRIM49CP0CI26 452 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 ATICP31939 592 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 OR1G1P47890 313 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 SLC11A1P49279 550 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 MXI1P50539 228 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 CLCNKBP51801 687 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 ERVK-21P61565 698 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 TAP1Q03518 808 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 KCNH2Q12809 1159 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 TDRD10Q5VZ19 366 aaKnown RBP17.07■□□□□ 0.32
NELFCD-203ENST00000471621 SLC39A11Q8N1S5 342 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 TAF4BQ92750 862 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 ZNF560Q96MR9 790 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 SPG21Q9NZD8 308 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 CITO14578 2027 aa17.07■□□□□ 0.32
NELFCD-203ENST00000471621 GTPBP10A4D1E9 387 aaKnown RBP17.06■□□□□ 0.32
NELFCD-203ENST00000471621 PHACTR2O75167 634 aa17.06■□□□□ 0.32
NELFCD-203ENST00000471621 ITGB3P05106 788 aa17.06■□□□□ 0.32
NELFCD-203ENST00000471621 MYOGP15173 224 aa17.06■□□□□ 0.32
NELFCD-203ENST00000471621 PBX2P40425 430 aa17.06■□□□□ 0.32
NELFCD-203ENST00000471621 GCLMP48507 274 aa17.06■□□□□ 0.32
NELFCD-203ENST00000471621 FMO5P49326 533 aa17.06■□□□□ 0.32
NELFCD-203ENST00000471621 PLCB3Q01970 1234 aa17.06■□□□□ 0.32
NELFCD-203ENST00000471621 ELAVL2Q12926 359 aaKnown RBP17.06■□□□□ 0.32
NELFCD-203ENST00000471621 BIRC3Q13489 604 aa17.06■□□□□ 0.32
NELFCD-203ENST00000471621 TRPC3Q13507 836 aa17.06■□□□□ 0.32
NELFCD-203ENST00000471621 VWA3BQ502W6 1294 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms