RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 HHIPQ96QV1 700 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 SPZ1Q9BXG8 430 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 RIOX1Q9H6W3 641 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 SENP2Q9HC62 589 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 CPNE5Q9HCH3 593 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 CHST12Q9NRB3 414 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 KCNH7Q9NS40 1196 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 TMEM74BQ9NUR3 256 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 RBM28Q9NW13 759 aaKnown RBP6.57□□□□□ -1.36
VARS-222ENST00000470953 SEPT3Q9UH03 358 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 FBXW11Q9UKB1 542 aa6.57□□□□□ -1.36
VARS-222ENST00000470953 TNRC6BQ9UPQ9 1833 aaKnown RBP6.57□□□□□ -1.36
VARS-222ENST00000470953 HIVEP1P15822 2718 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 ATXN2Q99700 1313 aaKnown RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 KLF18A0A0U1RQI7 1052 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 SPDYE3A6NKU9 549 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 DDX39AO00148 427 aaKnown RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 ARNTLO00327 626 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 BACH1O14867 736 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 PLEKHA8P1O95397 391 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 HLA-EP13747 358 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 BCKDHBP21953 392 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 GDI1P31150 447 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 LIFRP42702 1097 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 OR1G1P47890 313 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 DHPSP49366 369 aaPredicted RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 ATXN3P54252 364 aaPredicted RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 AKAP17AQ02040 695 aaKnown RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 KCNH2Q12809 1159 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 DRP2Q13474 957 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 KARSQ15046 597 aaKnown RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 UBE2SQ16763 222 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 PABPC1LQ4VXU2 614 aaKnown RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 FAM78AQ5JUQ0 283 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 DGKKQ5KSL6 1271 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 RTP2Q5QGT7 225 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 PPM1LQ5SGD2 360 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 ZNF787Q6DD87 383 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 TWF2Q6IBS0 349 aaKnown RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 SWSAP1Q6NVH7 229 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 EFCAB12Q6NXP0 572 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 DHX32Q7L7V1 743 aaKnown RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 TICAM1Q8IUC6 712 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 NAXDQ8IW45 347 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 CCDC82Q8N4S0 544 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 IGDCC4Q8TDY8 1250 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 BAP1Q92560 729 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 ELSPBP1Q96BH3 223 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 TCEAL4Q96EI5 215 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 MAP3K14Q99558 947 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 TMEM175Q9BSA9 504 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 TRMT61BQ9BVS5 477 aaKnown RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 TRAIPQ9BWF2 469 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 FAM105AQ9NUU6 356 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 MIOSQ9NXC5 875 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 TOR4AQ9NXH8 423 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 DACT1Q9NYF0 836 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 KIAA1522Q9P206 1035 aaPredicted RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 FNIP2Q9P278 1114 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 CACNG4Q9UBN1 327 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 STK39Q9UEW8 545 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 SLC8A2Q9UPR5 921 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 SSX2IPQ9Y2D8 614 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 MRPS23Q9Y3D9 190 aaKnown RBP6.56□□□□□ -1.36
VARS-222ENST00000470953 PCDH15Q96QU1 1955 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 CRYBG3Q68DQ2 2970 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 COL1A2P08123 1366 aa6.56□□□□□ -1.36
VARS-222ENST00000470953 PI4KAP42356 2102 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 CCDC196A0A1B0GTZ2 297 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 CARNS1A5YM72 827 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 PIK3CDO00329 1044 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 SUV39H1O43463 412 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 DIAPH2O60879 1101 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 C1RP00736 705 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 ITGB2P05107 769 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 HNRNPA1P09651 372 aaKnown RBP eCLIP6.55□□□□□ -1.36
VARS-222ENST00000470953 VIPR2P41587 438 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 SLC26A2P50443 739 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 NAPAP54920 295 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 TLE1Q04724 770 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 CCINQ13939 588 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 ZNF746Q6NUN9 644 aaPredicted RBP6.55□□□□□ -1.36
VARS-222ENST00000470953 APOA5Q6Q788 366 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 VITQ6UXI7 678 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 TMTC3Q6ZXV5 915 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 SGMS1Q86VZ5 419 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 FAM26EQ8N5C1 309 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 MINDY1Q8N5J2 469 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 FANCBQ8NB91 859 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 SNIP1Q8TAD8 396 aaKnown RBP6.55□□□□□ -1.36
VARS-222ENST00000470953 TTC8Q8TAM2 541 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 SLC7A14Q8TBB6 771 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 IRF7Q92985 503 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 ZSWIM3Q96MP5 696 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 FAM193BQ96PV7 902 aaPredicted RBP6.55□□□□□ -1.36
VARS-222ENST00000470953 CLSTN3Q9BQT9 956 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 CSRNP2Q9H175 543 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 ZNF302Q9NR11 478 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 KCNH3Q9ULD8 1083 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 PIN4Q9Y237 131 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms