RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 DBF4BQ8NFT6 615 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 ZNF516Q92618 1163 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 SCLYQ96I15 445 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 HTATIP2Q9BUP3 242 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 STK33Q9BYT3 514 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 DNAI2Q9GZS0 605 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 TSPYL2Q9H2G4 693 aaPredicted RBP10.51□□□□□ -0.73
CCM2-204ENST00000470837 TMX1Q9H3N1 280 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 DEF6Q9H4E7 631 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 DNAJC12Q9UKB3 198 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 TBX21Q9UL17 535 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 PCDHB7Q9Y5E2 793 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 FHOD1Q9Y613 1164 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 SIP14410 1827 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 FRMPD3Q5JV73 1810 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 SMIM28A0A1B0GU29 152 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 LRRC53A6NM62 1247 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 MGEA5O60502 916 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 EFCAB14O75071 495 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 ITGB3P05106 788 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 PFKMP08237 780 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 CYP3A5P20815 502 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 POLR2BP30876 1174 aaKnown RBP10.5□□□□□ -0.73
CCM2-204ENST00000470837 MLH1P40692 756 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 USP8P40818 1118 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 PNPLA4P41247 253 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 WNT7BP56706 349 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 TNNC1P63316 161 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 NOP14P78316 857 aaKnown RBP10.5□□□□□ -0.73
CCM2-204ENST00000470837 GCNT1Q02742 428 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 MBTPS1Q14703 1052 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 ASIC2Q16515 512 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 ARHGAP44Q17R89 818 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 ZNF667Q5HYK9 610 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 GLRA4Q5JXX5 417 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 IQCEQ6IPM2 695 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 PDXDC1Q6P996 788 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 TMTC1Q8IUR5 882 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 C1orf127Q8N9H9 656 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 TC2NQ8N9U0 490 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 RSPH1Q8WYR4 309 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 SYN2Q92777 582 aaPredicted RBP10.5□□□□□ -0.73
CCM2-204ENST00000470837 ZNF560Q96MR9 790 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 GAD1Q99259 594 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 DNAJC7Q99615 494 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 TTYH3Q9C0H2 523 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 GANQ9H2C0 597 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 RNF39Q9H2S5 420 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCM2-204ENST00000470837 KANSL3Q9P2N6 904 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 AGAP1Q9UPQ3 857 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 INPP5FQ9Y2H2 1132 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 BZW2Q9Y6E2 419 aaKnown RBP10.5□□□□□ -0.73
CCM2-204ENST00000470837 PTPRJQ12913 1337 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 UMODL1Q5DID0 1318 aa10.5□□□□□ -0.73
CCM2-204ENST00000470837 ARL5CA6NH57 179 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 C9IYK1 514 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 KIAA0355O15063 1070 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 EPHB6O15197 1021 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 NOL4O94818 638 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 ASS1P00966 412 aaKnown RBP10.49□□□□□ -0.73
CCM2-204ENST00000470837 CXCL10P02778 98 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 FERP16591 822 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 MSNP26038 577 aaKnown RBP10.49□□□□□ -0.73
CCM2-204ENST00000470837 CYLC1P35663 651 aaPredicted RBP10.49□□□□□ -0.73
CCM2-204ENST00000470837 MYL6P60660 151 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 ARID5AQ03989 594 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 RNASELQ05823 741 aaKnown RBP10.49□□□□□ -0.73
CCM2-204ENST00000470837 GOLGA8FQ08AF8 430 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 GOLGA8DPQ0D2H9 430 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 KLHL30Q0D2K2 578 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 DRAP1Q14919 205 aaPredicted RBP10.49□□□□□ -0.73
CCM2-204ENST00000470837 TDRD12Q587J7 1177 aaKnown RBP10.49□□□□□ -0.73
CCM2-204ENST00000470837 CNKSR3Q6P9H4 555 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 ALKAL1Q6UXT8 129 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 TTC39CQ8N584 583 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 LMO3Q8TAP4 145 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 SEMA4DQ92854 862 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 LPPQ93052 612 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 JAKMIP2Q96AA8 810 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 HPDLQ96IR7 371 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 FAXDC2Q96IV6 333 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 CCDC42Q96M95 316 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 ZNF830Q96NB3 372 aaPredicted RBP10.49□□□□□ -0.73
CCM2-204ENST00000470837 FAM193BQ96PV7 902 aaPredicted RBP10.49□□□□□ -0.73
CCM2-204ENST00000470837 PI4K2AQ9BTU6 479 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 NIF3L1Q9GZT8 377 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 WNT8AQ9H1J5 351 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 ELAC1Q9H777 363 aaKnown RBP10.49□□□□□ -0.73
CCM2-204ENST00000470837 SIX2Q9NPC8 291 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 TMEM161AQ9NX61 479 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 NXF1Q9UBU9 619 aaKnown RBP10.49□□□□□ -0.73
CCM2-204ENST00000470837 PLAGL2Q9UPG8 496 aa10.49□□□□□ -0.73
CCM2-204ENST00000470837 CENPFP49454 3210 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 ABHD14A-ACY1A0A1B0GW23 586 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 F8VZ95 297 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 ENPP3O14638 875 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 ARHGAP6O43182 974 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 CCP110O43303 1012 aa10.48□□□□□ -0.73
CCM2-204ENST00000470837 LRRN2O75325 713 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms