RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 DHX33Q9H6R0 707 aaKnown RBP20.39■□□□□ 0.85
VIM-203ENST00000469543 PCDHB4Q9Y5E5 795 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 PCDHB2Q9Y5E7 798 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 NFASCO94856 1347 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 GSTTP1A0A1W2PQM5 241 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 C19orf81C9J6K1 198 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 GTF2H1P32780 548 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 OAZ1P54368 228 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 PPP2R2AP63151 447 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 PPP1R7Q15435 360 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 SGO2Q562F6 1265 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 USP37Q86T82 979 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 SLC7A3Q8WY07 619 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 C12orf42Q96LP6 360 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 GINM1Q9NU53 330 aa20.39■□□□□ 0.85
VIM-203ENST00000469543 PGK2P07205 417 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 SRGAP2CP0DJJ0 459 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 SSR1P43307 286 aaKnown RBP20.38■□□□□ 0.85
VIM-203ENST00000469543 TAS2R40P59535 323 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 VGLL4Q14135 290 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 PSMD6Q15008 389 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 CEP89Q96ST8 783 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 BRCA2P51587 3418 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 USP2O75604 605 aaPredicted RBP20.38■□□□□ 0.85
VIM-203ENST00000469543 CD58P19256 250 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 NSFP46459 744 aaKnown RBP20.38■□□□□ 0.85
VIM-203ENST00000469543 ADCY2Q08462 1091 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 MMS22LQ6ZRQ5 1243 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 PACS2Q86VP3 889 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 NCAPG2Q86XI2 1143 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 LRRC71Q8N4P6 559 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 C1orf131Q8NDD1 294 aaKnown RBP20.38■□□□□ 0.85
VIM-203ENST00000469543 BBXQ8WY36 941 aaPredicted RBP20.38■□□□□ 0.85
VIM-203ENST00000469543 TCHPQ9BT92 498 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 PAGR1Q9BTK6 254 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 AZI2Q9H6S1 392 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 RASAL2Q9UJF2 1139 aa20.38■□□□□ 0.85
VIM-203ENST00000469543 SSC5DA1L4H1 1573 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 OSTNP61366 133 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 RPL7AP62424 266 aaKnown RBP20.37■□□□□ 0.85
VIM-203ENST00000469543 CLDN10P78369 228 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 CAPSQ13938 189 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 CCDC50Q8IVM0 306 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 MICALL1Q8N3F8 863 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 PRPF31Q8WWY3 499 aaKnown RBP20.37■□□□□ 0.85
VIM-203ENST00000469543 RAPGEF5Q92565 580 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 CDHR1Q96JP9 859 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 TMEM51Q9NW97 253 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 MTUS1Q9ULD2 1270 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 DOCK1Q14185 1865 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 CHKAP35790 457 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 ARL2P36404 184 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 RTP1P59025 263 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 KRT17Q04695 432 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 CUL2Q13617 745 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 DENND2CQ68D51 928 aa20.37■□□□□ 0.85
VIM-203ENST00000469543 ACSF2Q96CM8 615 aaPredicted RBP20.37■□□□□ 0.85
VIM-203ENST00000469543 ARID2Q68CP9 1835 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 SOWAHBA6NEL2 793 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 ATP2A1O14983 1001 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 FARP2O94887 1054 aaPredicted RBP20.36■□□□□ 0.85
VIM-203ENST00000469543 ACSL3O95573 720 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 GNA15P30679 374 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 MAGEA9P43362 315 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 DRG2P55039 364 aaKnown RBP20.36■□□□□ 0.85
VIM-203ENST00000469543 PODXLO00592 558 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 DKC1O60832 514 aaKnown RBP eCLIP20.36■□□□□ 0.85
VIM-203ENST00000469543 ERLIN2O94905 339 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 RALAP11233 206 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 ALDH5A1P51649 535 aaPredicted RBP20.36■□□□□ 0.85
VIM-203ENST00000469543 PPP2R5EQ16537 467 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 CYP1B1Q16678 543 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 HSDL1Q3SXM5 330 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 MOB2Q70IA6 237 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 TRAPPC12Q8WVT3 735 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 MTFR1LQ9H019 292 aa20.36■□□□□ 0.85
VIM-203ENST00000469543 CNTNAP2Q9UHC6 1331 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 LCTP09848 1927 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 A0A0B4J269 797 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 PI4K2BG5E9Z4 385 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 CSDE1O75534 798 aaKnown RBP20.35■□□□□ 0.85
VIM-203ENST00000469543 ATG7O95352 703 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 ARIH2O95376 493 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 ECEL1O95672 775 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 TCF7P36402 384 aaPredicted RBP20.35■□□□□ 0.85
VIM-203ENST00000469543 NOP14P78316 857 aaKnown RBP20.35■□□□□ 0.85
VIM-203ENST00000469543 IFT88Q13099 833 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 MON1BQ7L1V2 547 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 DDX27Q96GQ7 796 aaKnown RBP20.35■□□□□ 0.85
VIM-203ENST00000469543 AAASQ9NRG9 546 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 GPRC5DQ9NZD1 345 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 ADAM22Q9P0K1 906 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 STYXL1Q9Y6J8 313 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 FSCN2O14926 492 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 THAP12O43422 761 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 FAM107AO95990 144 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 CYP1A1P04798 512 aaPredicted RBP20.35■□□□□ 0.85
VIM-203ENST00000469543 STAT5BP51692 787 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 MAMLD1Q13495 774 aa20.35■□□□□ 0.85
VIM-203ENST00000469543 LONRF1Q17RB8 773 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms