RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 PRKCEQ02156 737 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 DSC1Q08554 894 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 ADCY1Q08828 1119 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 GRM2Q14416 872 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 MTERF2Q49AM1 385 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 LRSAM1Q6UWE0 723 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 CYP26C1Q6V0L0 522 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 FAM43BQ6ZT52 329 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-209ENST00000469511 TMTC3Q6ZXV5 915 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 RHPN2Q8IUC4 686 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 NPAS3Q8IXF0 933 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 GSTCDQ8NEC7 633 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 NCOA7Q8NI08 942 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 LENG9Q96B70 501 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 ZFP42Q96MM3 310 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 NLRP4Q96MN2 994 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 MBOAT7Q96N66 472 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 FAM193BQ96PV7 902 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-209ENST00000469511 GAD1Q99259 594 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 CLSTN3Q9BQT9 956 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 TMEM175Q9BSA9 504 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 ZNF577Q9BSK1 485 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 PHF20Q9BVI0 1012 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 GCOM2Q9BZD3 368 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-209ENST00000469511 ARRDC1-AS1Q9H2J1 176 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 CHRDQ9H2X0 955 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 RSAD1Q9HA92 442 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 LMAN1LQ9HAT1 526 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 IFT122Q9HBG6 1241 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 POLR3BQ9NW08 1133 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-209ENST00000469511 ZDHHC7Q9NXF8 308 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 POLIQ9UNA4 740 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 PCDHA10Q9Y5I2 948 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 USP3Q9Y6I4 520 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 PI4KAP42356 2102 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 ADAMTS9Q9P2N4 1935 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 CNTNAP5Q8WYK1 1306 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 THADAQ6YHU6 1953 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 DSPP15924 2871 aaKnown RBP5.92□□□□□ -1.46
PTPN4-209ENST00000469511 IGKV6-21A0A0C4DH24 114 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 K7ESF4 209 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 TAF4O00268 1085 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 SH2B2O14492 632 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-209ENST00000469511 CHMP2AO43633 222 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 PRC1O43663 620 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 IGHDP01880 384 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 C8AP07357 584 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 PSAPP07602 524 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 CHRNB1P11230 501 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 FCARP24071 287 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 TMOD1P28289 359 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 MLH1P40692 756 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 SOX9P48436 509 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 PXNP49023 591 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-209ENST00000469511 NAPAP54920 295 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 TRDNQ13061 729 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 TBCELQ5QJ74 424 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 STPG1Q5TH74 334 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 PLA2G4FQ68DD2 849 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 IL31Q6EBC2 164 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 TCEAL6Q6IPX3 200 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 PSAPL1Q6NUJ1 521 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 ZNF746Q6NUN9 644 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-209ENST00000469511 MRPL14Q6P1L8 145 aaKnown RBP5.92□□□□□ -1.46
PTPN4-209ENST00000469511 FUT10Q6P4F1 479 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 RSPO2Q6UXX9 243 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-209ENST00000469511 Q6ZS52 159 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 CAPN12Q6ZSI9 719 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 NIPA1Q7RTP0 329 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 CATSPER4Q7RTX7 472 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 CDR2LQ86X02 465 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-209ENST00000469511 TICAM2Q86XR7 235 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 CELF5Q8N6W0 485 aaKnown RBP5.92□□□□□ -1.46
PTPN4-209ENST00000469511 URGCPQ8TCY9 931 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 RHBDD1Q8TEB9 315 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 HASPINQ8TF76 798 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 HDAC7Q8WUI4 952 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 TCEAL3Q969E4 200 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 TCEAL4Q96EI5 215 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 INSM2Q96T92 566 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-209ENST00000469511 MAP3K14Q99558 947 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 MKNK1Q9BUB5 465 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 APOL6Q9BWW8 343 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 UNC45AQ9H3U1 944 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 PLEKHA4Q9H4M7 779 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 AGPAT5Q9NUQ2 364 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 KLK14Q9P0G3 267 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 SUCLA2Q9P2R7 463 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-209ENST00000469511 SEPT3Q9UH03 358 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 FBXW11Q9UKB1 542 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 RAB23Q9ULC3 237 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 CEP131Q9UPN4 1083 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 SAMM50Q9Y512 469 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 SHROOM3Q8TF72 1996 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 MYO16Q9Y6X6 1858 aa5.92□□□□□ -1.46
PTPN4-209ENST00000469511 PLXNB3Q9ULL4 1909 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 IGSF10Q6WRI0 2623 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 SERTM1A2A2V5 107 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 ARL5CA6NH57 179 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 SOBPA7XYQ1 873 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms