RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 TADA2BQ86TJ2 420 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 ARFGAP2Q8N6H7 521 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 PABPC3Q9H361 631 aaKnown RBP19.03■□□□□ 0.64
MCF2L-221ENST00000469415 ST6GALNAC4Q9H4F1 302 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 DOCK5Q9H7D0 1870 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 VNN1O95497 513 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 CHN1P15882 459 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 RPL7AP62424 266 aaKnown RBP19.03■□□□□ 0.64
MCF2L-221ENST00000469415 IGBP1P78318 339 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 KYNUQ16719 465 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 GSTA5Q7RTV2 222 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 ANKRD42Q8N9B4 389 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 REPS2Q8NFH8 660 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 SPIRE2Q8WWL2 714 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 C10orf88Q9H8K7 445 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 MROH7Q68CQ1 1323 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 GMNCA6NCL1 334 aa19.02■□□□□ 0.64
MCF2L-221ENST00000469415 PPFIA2O75334 1257 aa19.02■□□□□ 0.64
MCF2L-221ENST00000469415 TFAMQ00059 246 aaKnown RBP19.02■□□□□ 0.64
MCF2L-221ENST00000469415 DHX34Q14147 1143 aaKnown RBP19.02■□□□□ 0.64
MCF2L-221ENST00000469415 CD101Q93033 1021 aa19.02■□□□□ 0.64
MCF2L-221ENST00000469415 RPS6KC1Q96S38 1066 aa19.02■□□□□ 0.64
MCF2L-221ENST00000469415 MTFR1LQ9H019 292 aa19.02■□□□□ 0.64
MCF2L-221ENST00000469415 NXF1Q9UBU9 619 aaKnown RBP19.02■□□□□ 0.64
MCF2L-221ENST00000469415 CD2APQ9Y5K6 639 aa19.02■□□□□ 0.64
MCF2L-221ENST00000469415 PIAS1O75925 651 aa19.02■□□□□ 0.63
MCF2L-221ENST00000469415 ANKS1BQ7Z6G8 1248 aa19.02■□□□□ 0.63
MCF2L-221ENST00000469415 SAMD3Q8N6K7 520 aa19.02■□□□□ 0.63
MCF2L-221ENST00000469415 CEP120Q8N960 986 aa19.02■□□□□ 0.63
MCF2L-221ENST00000469415 MTMR12Q9C0I1 747 aa19.02■□□□□ 0.63
MCF2L-221ENST00000469415 ARHGAP28Q9P2N2 729 aa19.02■□□□□ 0.63
MCF2L-221ENST00000469415 SLC12A6Q9UHW9 1150 aa19.02■□□□□ 0.63
MCF2L-221ENST00000469415 FAM187AA6NFU0 413 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 EXTL3O43909 919 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 KRT19P08727 400 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 ADCY2Q08462 1091 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 R3HDM1Q15032 1099 aaKnown RBP19.01■□□□□ 0.63
MCF2L-221ENST00000469415 CYP4F22Q6NT55 531 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 CRELD2Q6UXH1 353 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-221ENST00000469415 CATSPERGQ6ZRH7 1159 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 RBBP8NLQ8NC74 664 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-221ENST00000469415 PRPF31Q8WWY3 499 aaKnown RBP19.01■□□□□ 0.63
MCF2L-221ENST00000469415 KAT2BQ92831 832 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 C9orf72Q96LT7 481 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 NLRP4Q96MN2 994 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 DIS3Q9Y2L1 958 aaKnown RBP19.01■□□□□ 0.63
MCF2L-221ENST00000469415 COQ4Q9Y3A0 265 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 MYPNQ86TC9 1320 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 PASKQ96RG2 1323 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 TLR3O15455 904 aaKnown RBP19.01■□□□□ 0.63
MCF2L-221ENST00000469415 OATP04181 439 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 BRD2P25440 801 aaKnown RBP19.01■□□□□ 0.63
MCF2L-221ENST00000469415 HIRAP54198 1017 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-221ENST00000469415 NOP14P78316 857 aaKnown RBP19.01■□□□□ 0.63
MCF2L-221ENST00000469415 CYP4A22Q5TCH4 519 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 B4GALNT4Q76KP1 1039 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 TMC2Q8TDI7 906 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 PPP1R13LQ8WUF5 828 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 NTPCRQ9BSD7 190 aaKnown RBP19.01■□□□□ 0.63
MCF2L-221ENST00000469415 KCNK9Q9NPC2 374 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 DNAH12Q6ZR08 3092 aa19.01■□□□□ 0.63
MCF2L-221ENST00000469415 GSTTP1A0A1W2PQM5 241 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 GOLGA8SH3BPF8 625 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 GGPS1O95749 300 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 ZSCAN5DPP0CG00 497 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 CTNNA2P26232 953 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 DYNLT1P63172 113 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 SPRED3Q2MJR0 410 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 PSPC1Q8WXF1 523 aaKnown RBP19■□□□□ 0.63
MCF2L-221ENST00000469415 KLRG1Q96E93 195 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 OTUD5Q96G74 571 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 CABS1Q96KC9 395 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 BTBD7Q9P203 1132 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 PCDHB2Q9Y5E7 798 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 SPATA31C2B4DYI2 1134 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 PIK3R2O00459 728 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 VIMP08670 466 aaKnown RBP19■□□□□ 0.63
MCF2L-221ENST00000469415 UBA1P22314 1058 aaKnown RBP19■□□□□ 0.63
MCF2L-221ENST00000469415 PLCB3Q01970 1234 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 NCOA4Q13772 614 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 SIX1Q15475 284 aaPredicted RBP19■□□□□ 0.63
MCF2L-221ENST00000469415 ZACNQ401N2 412 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 NLGN2Q8NFZ4 835 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 COPS5Q92905 334 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 FBXL18Q96ME1 805 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 ZNF646O15015 1829 aaPredicted RBP19■□□□□ 0.63
MCF2L-221ENST00000469415 CUL2Q13617 745 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 TTLL12Q14166 644 aaPredicted RBP19■□□□□ 0.63
MCF2L-221ENST00000469415 RNF149Q8NC42 400 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 PPM1EQ8WY54 764 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 SEC14L1Q92503 715 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 SCLT1Q96NL6 688 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 UVRAGQ9P2Y5 699 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 SAE1Q9UBE0 346 aaPredicted RBP19■□□□□ 0.63
MCF2L-221ENST00000469415 AFG3L2Q9Y4W6 797 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 ATAD5Q96QE3 1844 aa19■□□□□ 0.63
MCF2L-221ENST00000469415 RASGRF2O14827 1237 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 IFNB1P01574 187 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 ETS1P14921 441 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 CD19P15391 556 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms