RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 SPATA1Q5VX52 437 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 DCLRE1AQ6PJP8 1040 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 CBWD2Q8IUF1 395 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 C12orf56Q8IXR9 622 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 EFHBQ8N7U6 833 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 SPATA20Q8TB22 786 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 HLA-CQ95604 372 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 PPP2R3CQ969Q6 453 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 FAM84AQ96KN4 292 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 ASB7Q9H672 318 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 CLDND1Q9NY35 253 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 RBAKQ9NYW8 714 aaPredicted RBP11.94□□□□□ -0.5
SNU13-206ENST00000469028 STK39Q9UEW8 545 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 COG5Q9UP83 839 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 PCDHA5Q9Y5H7 936 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 VWA8A3KMH1 1905 aa11.94□□□□□ -0.5
SNU13-206ENST00000469028 I3L4J1 428 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 KIAA0391O15091 583 aaKnown RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 KINO60870 393 aaKnown RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 URODP06132 367 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 CNPP09543 421 aaKnown RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 KCNA5P22460 613 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 RPL9P32969 192 aaKnown RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 SNRPFP62306 86 aaKnown RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 TMEM132DQ14C87 1099 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 USP41Q3LFD5 358 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 FAM171A1Q5VUB5 890 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 SCARA3Q6AZY7 606 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 HS2ST1Q7LGA3 356 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 ELOA2Q8IYF1 753 aaPredicted RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 SMYD4Q8IYR2 804 aaPredicted RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 NOC3LQ8WTT2 800 aaKnown RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 CCDC47Q96A33 483 aaKnown RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 DDX27Q96GQ7 796 aaKnown RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 CCDC34Q96HJ3 373 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 FBXL18Q96ME1 805 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 KLHL5Q96PQ7 755 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 TSPAN18Q96SJ8 248 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 CDCA3Q99618 268 aaPredicted RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 MRPL17Q9NRX2 175 aaKnown RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 CLEC1BQ9P126 229 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 BARX2Q9UMQ3 279 aaPredicted RBP11.93□□□□□ -0.5
SNU13-206ENST00000469028 MAPK8IP1Q9UQF2 711 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 DERAQ9Y315 318 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 C2CD2Q9Y426 696 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 HCFC2Q9Y5Z7 792 aa11.93□□□□□ -0.5
SNU13-206ENST00000469028 PTPRJQ12913 1337 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 BRWD1Q9NSI6 2320 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 H3BQ06 376 aaPredicted RBP11.92□□□□□ -0.5
SNU13-206ENST00000469028 TEX28O15482 410 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 NCK2O43639 380 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 IL18RAPO95256 599 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 FGFR3P22607 806 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 TKTP29401 623 aaKnown RBP11.92□□□□□ -0.5
SNU13-206ENST00000469028 CYP2J2P51589 502 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 KCNQ1P51787 676 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 LLGL2Q6P1M3 1020 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 PRSS55Q6UWB4 352 aaPredicted RBP11.92□□□□□ -0.5
SNU13-206ENST00000469028 EP400NLQ6ZTU2 488 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 GUF1Q8N442 669 aaKnown RBP11.92□□□□□ -0.5
SNU13-206ENST00000469028 BEST2Q8NFU1 509 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.92□□□□□ -0.5
SNU13-206ENST00000469028 LNX1Q8TBB1 728 aaPredicted RBP11.92□□□□□ -0.5
SNU13-206ENST00000469028 SLC22A17Q8WUG5 538 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 ATXN2LQ8WWM7 1075 aaKnown RBP11.92□□□□□ -0.5
SNU13-206ENST00000469028 RIN2Q8WYP3 895 aaPredicted RBP11.92□□□□□ -0.5
SNU13-206ENST00000469028 GSDMAQ96QA5 445 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 GZF1Q9H116 711 aaPredicted RBP11.92□□□□□ -0.5
SNU13-206ENST00000469028 RXFP1Q9HBX9 757 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 PDE11AQ9HCR9 933 aa11.92□□□□□ -0.5
SNU13-206ENST00000469028 CGNQ9P2M7 1197 aaKnown RBP11.92□□□□□ -0.5
SNU13-206ENST00000469028 ANO9A1A5B4 782 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 ZNF233A6NK53 670 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 PIRO00625 290 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 PDXKO00764 312 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 SPTLC1O15269 473 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 XPOTO43592 962 aaKnown RBP11.91□□□□□ -0.5
SNU13-206ENST00000469028 EPCAMP16422 314 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 RPL17P18621 184 aaKnown RBP11.91□□□□□ -0.5
SNU13-206ENST00000469028 AARSP49588 968 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNU13-206ENST00000469028 NDUFV1P49821 464 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 ELAVL2Q12926 359 aaKnown RBP11.91□□□□□ -0.5
SNU13-206ENST00000469028 BMS1Q14692 1282 aaKnown RBP11.91□□□□□ -0.5
SNU13-206ENST00000469028 SNRNP35Q16560 246 aaKnown RBP11.91□□□□□ -0.5
SNU13-206ENST00000469028 LEXMQ3ZCV2 418 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 ZNF658Q5TYW1 1059 aaPredicted RBP11.91□□□□□ -0.5
SNU13-206ENST00000469028 C9orf57Q5W0N0 161 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 LMBRD2Q68DH5 695 aaPredicted RBP11.91□□□□□ -0.5
SNU13-206ENST00000469028 KIAA1841Q6NSI8 718 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 TMEM184AQ6ZMB5 413 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.91□□□□□ -0.5
SNU13-206ENST00000469028 CEP57Q86XR8 500 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 XXYLT1Q8NBI6 393 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 RDH13Q8NBN7 331 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 CXorf38Q8TB03 319 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 PLEKHO2Q8TD55 490 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 PIK3R5Q8WYR1 880 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 SMARCE1Q969G3 411 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 MSLNLQ96KJ4 702 aa11.91□□□□□ -0.5
SNU13-206ENST00000469028 ASB2Q96Q27 587 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms