RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 SURF1Q15526 300 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 KIAA1841Q6NSI8 718 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 PDXDC1Q6P996 788 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 RBM23Q86U06 439 aaKnown RBP21.73■■□□□ 1.07
NPHP4-206ENST00000468253 PPFIBP1Q86W92 1011 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 SLC9A9Q8IVB4 645 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 GUF1Q8N442 669 aaKnown RBP21.73■■□□□ 1.07
NPHP4-206ENST00000468253 FAM212AQ96EL1 285 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 KCTD10Q9H3F6 313 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 PCIF1Q9H4Z3 704 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 IGFLR1Q9H665 355 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 PRDM6Q9NQX0 595 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 CACNG4Q9UBN1 327 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 PER2O15055 1255 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 LTBRP36941 435 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 GLUD2P49448 558 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 CREMQ03060 361 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 TMEM132DQ14C87 1099 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 JADE1Q6IE81 842 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.72■■□□□ 1.07
NPHP4-206ENST00000468253 XXYLT1Q8NBI6 393 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 SAAL1Q96ER3 474 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 TTPALQ9BTX7 342 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 GOLGA2P5Q9HBQ8 144 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 DMAC2Q9NW81 257 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 FNIP2Q9P278 1114 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 PCDHA5Q9Y5H7 936 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 EYSQ5T1H1 3165 aa21.72■■□□□ 1.07
NPHP4-206ENST00000468253 KIAA1671Q9BY89 1806 aa21.71■■□□□ 1.07
NPHP4-206ENST00000468253 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.71■■□□□ 1.07
NPHP4-206ENST00000468253 CLASP2O75122 1294 aaKnown RBP21.71■■□□□ 1.07
NPHP4-206ENST00000468253 FGFR3P22607 806 aa21.71■■□□□ 1.07
NPHP4-206ENST00000468253 GTF2F1P35269 517 aaKnown RBP eCLIP21.71■■□□□ 1.07
NPHP4-206ENST00000468253 SPAG1Q07617 926 aa21.71■■□□□ 1.07
NPHP4-206ENST00000468253 LEXMQ3ZCV2 418 aa21.71■■□□□ 1.07
NPHP4-206ENST00000468253 COBLL1Q53SF7 1204 aa21.71■■□□□ 1.07
NPHP4-206ENST00000468253 FAM171A1Q5VUB5 890 aa21.71■■□□□ 1.07
NPHP4-206ENST00000468253 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.71■■□□□ 1.07
NPHP4-206ENST00000468253 ZSWIM2Q8NEG5 633 aa21.71■■□□□ 1.07
NPHP4-206ENST00000468253 CACTINQ8WUQ7 758 aaKnown RBP21.71■■□□□ 1.07
NPHP4-206ENST00000468253 SMARCE1Q969G3 411 aa21.71■■□□□ 1.07
NPHP4-206ENST00000468253 KLHL5Q96PQ7 755 aa21.71■■□□□ 1.07
NPHP4-206ENST00000468253 CLDND1Q9NY35 253 aa21.71■■□□□ 1.07
NPHP4-206ENST00000468253 RBAKQ9NYW8 714 aaPredicted RBP21.71■■□□□ 1.07
NPHP4-206ENST00000468253 TRAF3IP3Q9Y228 551 aa21.71■■□□□ 1.07
NPHP4-206ENST00000468253 A0A0C4DFX4 3053 aa21.7■■□□□ 1.06
NPHP4-206ENST00000468253 COL4A4P53420 1690 aaPredicted RBP21.7■■□□□ 1.06
NPHP4-206ENST00000468253 GOLGA8IPA6NC78 632 aa21.7■■□□□ 1.06
NPHP4-206ENST00000468253 GOLGA8JA6NMD2 632 aa21.7■■□□□ 1.06
NPHP4-206ENST00000468253 CSPG5O95196 566 aa21.7■■□□□ 1.06
NPHP4-206ENST00000468253 NFIL3Q16649 462 aa21.7■■□□□ 1.06
NPHP4-206ENST00000468253 PUS10Q3MIT2 529 aaKnown RBP21.7■■□□□ 1.06
NPHP4-206ENST00000468253 AUTS2Q8WXX7 1259 aa21.7■■□□□ 1.06
NPHP4-206ENST00000468253 PIK3R5Q8WYR1 880 aa21.7■■□□□ 1.06
NPHP4-206ENST00000468253 ASB2Q96Q27 587 aa21.7■■□□□ 1.06
NPHP4-206ENST00000468253 TUBGCP4Q9UGJ1 667 aa21.7■■□□□ 1.06
NPHP4-206ENST00000468253 BRWD1Q9NSI6 2320 aa21.7■■□□□ 1.06
NPHP4-206ENST00000468253 ANO9A1A5B4 782 aa21.69■■□□□ 1.06
NPHP4-206ENST00000468253 PIRO00625 290 aa21.69■■□□□ 1.06
NPHP4-206ENST00000468253 SYN3O14994 580 aa21.69■■□□□ 1.06
NPHP4-206ENST00000468253 CLIC2O15247 247 aa21.69■■□□□ 1.06
NPHP4-206ENST00000468253 CNPP09543 421 aaKnown RBP21.69■■□□□ 1.06
NPHP4-206ENST00000468253 SRGAP2BP0DMP2 458 aa21.69■■□□□ 1.06
NPHP4-206ENST00000468253 IGFBP6P24592 240 aaPredicted RBP21.69■■□□□ 1.06
NPHP4-206ENST00000468253 ZNF658Q5TYW1 1059 aaPredicted RBP21.69■■□□□ 1.06
NPHP4-206ENST00000468253 C3orf58Q8NDZ4 430 aa21.69■■□□□ 1.06
NPHP4-206ENST00000468253 SLC22A17Q8WUG5 538 aa21.69■■□□□ 1.06
NPHP4-206ENST00000468253 RIN2Q8WYP3 895 aaPredicted RBP21.69■■□□□ 1.06
NPHP4-206ENST00000468253 SUSD3Q96L08 255 aa21.69■■□□□ 1.06
NPHP4-206ENST00000468253 GBP4Q96PP9 640 aa21.69■■□□□ 1.06
NPHP4-206ENST00000468253 DPP3Q9NY33 737 aa21.69■■□□□ 1.06
NPHP4-206ENST00000468253 NUB1Q9Y5A7 615 aa21.69■■□□□ 1.06
NPHP4-206ENST00000468253 SPTBN5Q9NRC6 3674 aaKnown RBP21.68■■□□□ 1.06
NPHP4-206ENST00000468253 CALUO43852 315 aaPredicted RBP21.68■■□□□ 1.06
NPHP4-206ENST00000468253 NFICP08651 508 aa21.68■■□□□ 1.06
NPHP4-206ENST00000468253 HOXB8P17481 243 aaPredicted RBP21.68■■□□□ 1.06
NPHP4-206ENST00000468253 KCNA5P22460 613 aa21.68■■□□□ 1.06
NPHP4-206ENST00000468253 KLRC2P26717 231 aa21.68■■□□□ 1.06
NPHP4-206ENST00000468253 AARSP49588 968 aaKnown RBP eCLIP21.68■■□□□ 1.06
NPHP4-206ENST00000468253 SNRNP35Q16560 246 aaKnown RBP21.68■■□□□ 1.06
NPHP4-206ENST00000468253 C9orf57Q5W0N0 161 aa21.68■■□□□ 1.06
NPHP4-206ENST00000468253 CBWD2Q8IUF1 395 aa21.68■■□□□ 1.06
NPHP4-206ENST00000468253 LNX1Q8TBB1 728 aaPredicted RBP21.68■■□□□ 1.06
NPHP4-206ENST00000468253 HASPINQ8TF76 798 aa21.68■■□□□ 1.06
NPHP4-206ENST00000468253 CASP10Q92851 521 aa21.68■■□□□ 1.06
NPHP4-206ENST00000468253 MSLNLQ96KJ4 702 aa21.68■■□□□ 1.06
NPHP4-206ENST00000468253 MFSD14AQ96MC6 490 aa21.68■■□□□ 1.06
NPHP4-206ENST00000468253 CLEC1BQ9P126 229 aa21.68■■□□□ 1.06
NPHP4-206ENST00000468253 REV3LO60673 3130 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 PLXNA4Q9HCM2 1894 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 C2CD2LO14523 706 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 TEX28O15482 410 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 LINC01565O15544 149 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 ADH1AP07327 375 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 CA8P35219 290 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 CYP2J2P51589 502 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 LILRA4P59901 499 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 DUOXA2Q1HG44 320 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 RTP2Q5QGT7 225 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 ANKS3Q6ZW76 656 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms