RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 ACAP3Q96P50 834 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 MRPS23Q9Y3D9 190 aaKnown RBP18.91■□□□□ 0.62
TRIM56-203ENST00000467847 COL4A3Q01955 1670 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 FANCMQ8IYD8 2048 aa18.91■□□□□ 0.62
TRIM56-203ENST00000467847 PDCD11Q14690 1871 aaKnown RBP18.9■□□□□ 0.62
TRIM56-203ENST00000467847 KANSL1LA0AUZ9 987 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 PRRG1O14668 218 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 SLC16A4O15374 487 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 RHOP08100 348 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 HARSP12081 509 aaKnown RBP18.9■□□□□ 0.62
TRIM56-203ENST00000467847 GLULP15104 373 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 KCNE1P15382 129 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 PRPHP41219 470 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 PFKPQ01813 784 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 ROR1Q01973 937 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 MAPK7Q13164 816 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 ZRSR1Q15695 479 aaKnown RBP18.9■□□□□ 0.62
TRIM56-203ENST00000467847 MLF2Q15773 248 aaPredicted RBP18.9■□□□□ 0.62
TRIM56-203ENST00000467847 MPZL3Q6UWV2 235 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 C1orf186Q6ZWK4 172 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 KCNK18Q7Z418 384 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 ZNF461Q8TAF7 563 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 C17orf75Q9HAS0 396 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 NUB1Q9Y5A7 615 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 FRYLO94915 3013 aa18.9■□□□□ 0.62
TRIM56-203ENST00000467847 DMXL1Q9Y485 3027 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 SFI1A8K8P3 1242 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 LRRN2O75325 713 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 LRG1P02750 347 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 SP9P0CG40 484 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 PROZP22891 400 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 ELF1P32519 619 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 ARPP19P56211 112 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 PRKCQQ04759 706 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 PUM1Q14671 1186 aaKnown RBP eCLIP18.89■□□□□ 0.61
TRIM56-203ENST00000467847 SLC5A9Q2M3M2 681 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 SLC44A4Q53GD3 710 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 ZC3H14Q6PJT7 736 aaKnown RBP18.89■□□□□ 0.61
TRIM56-203ENST00000467847 C18orf25Q96B23 403 aaPredicted RBP18.89■□□□□ 0.61
TRIM56-203ENST00000467847 MCRS1Q96EZ8 462 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 KIF2CQ99661 725 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 MMTAG2Q9BU76 263 aaKnown RBP18.89■□□□□ 0.61
TRIM56-203ENST00000467847 TIPINQ9BVW5 301 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 GDE1Q9NZC3 331 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 CNTN3Q9P232 1028 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 ANKFY1Q9P2R3 1169 aa18.89■□□□□ 0.61
TRIM56-203ENST00000467847 ARHGEF37A1IGU5 675 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 WDR27A2RRH5 827 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 H7C4K7 107 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 ABLIM1O14639 778 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 SYN3O14994 580 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 ABLIM3O94929 683 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 PTPN2P17706 415 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 RPL9P32969 192 aaKnown RBP18.88■□□□□ 0.61
TRIM56-203ENST00000467847 RAD51AP2Q09MP3 1159 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 STRN3Q13033 797 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 UBXN2BQ14CS0 331 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 DDX23Q9BUQ8 820 aaKnown RBP18.88■□□□□ 0.61
TRIM56-203ENST00000467847 BCO2Q9BYV7 579 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 AVENQ9NQS1 362 aaPredicted RBP18.88■□□□□ 0.61
TRIM56-203ENST00000467847 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.88■□□□□ 0.61
TRIM56-203ENST00000467847 PATJQ8NI35 1801 aa18.88■□□□□ 0.61
TRIM56-203ENST00000467847 ECI2O75521 394 aa18.87■□□□□ 0.61
TRIM56-203ENST00000467847 ATF2P15336 505 aa18.87■□□□□ 0.61
TRIM56-203ENST00000467847 GUCY2CP25092 1073 aa18.87■□□□□ 0.61
TRIM56-203ENST00000467847 NOLC1Q14978 699 aaKnown RBP eCLIP18.87■□□□□ 0.61
TRIM56-203ENST00000467847 OTOGLQ3ZCN5 2332 aa18.87■□□□□ 0.61
TRIM56-203ENST00000467847 MCTP1Q6DN14 999 aa18.87■□□□□ 0.61
TRIM56-203ENST00000467847 ZBTB45Q96K62 511 aaPredicted RBP18.87■□□□□ 0.61
TRIM56-203ENST00000467847 CORO1BQ9BR76 489 aa18.87■□□□□ 0.61
TRIM56-203ENST00000467847 NTPCRQ9BSD7 190 aaKnown RBP18.87■□□□□ 0.61
TRIM56-203ENST00000467847 CYP4F11Q9HBI6 524 aa18.87■□□□□ 0.61
TRIM56-203ENST00000467847 FBXL5Q9UKA1 691 aa18.87■□□□□ 0.61
TRIM56-203ENST00000467847 MTF2Q9Y483 593 aaPredicted RBP18.87■□□□□ 0.61
TRIM56-203ENST00000467847 KIF3AQ9Y496 699 aa18.87■□□□□ 0.61
TRIM56-203ENST00000467847 FAM170BA6NMN3 283 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 MEFVO15553 781 aaPredicted RBP18.86■□□□□ 0.61
TRIM56-203ENST00000467847 TBC1D4O60343 1298 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 TOM1L1O75674 476 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 PLS3P13797 630 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 CEBPBP17676 345 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 MCM4P33991 863 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 SMTNP53814 917 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 CTXN3Q4LDR2 81 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 TCEAL8Q8IYN2 117 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 SPIRE2Q8WWL2 714 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 SUSD3Q96L08 255 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 OSBPL6Q9BZF3 934 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 SPATA6Q9NWH7 488 aaPredicted RBP18.86■□□□□ 0.61
TRIM56-203ENST00000467847 KCNG1Q9UIX4 513 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 INSL5Q9Y5Q6 135 aa18.86■□□□□ 0.61
TRIM56-203ENST00000467847 SEC24AO95486 1093 aa18.85■□□□□ 0.61
TRIM56-203ENST00000467847 MAPTP10636 758 aaKnown RBP18.85■□□□□ 0.61
TRIM56-203ENST00000467847 CD72P21854 359 aa18.85■□□□□ 0.61
TRIM56-203ENST00000467847 ATP2C1P98194 919 aaPredicted RBP18.85■□□□□ 0.61
TRIM56-203ENST00000467847 MRPL58Q14197 206 aaKnown RBP18.85■□□□□ 0.61
TRIM56-203ENST00000467847 SEZ6Q53EL9 994 aa18.85■□□□□ 0.61
TRIM56-203ENST00000467847 RILPL1Q5EBL4 403 aa18.85■□□□□ 0.61
TRIM56-203ENST00000467847 TPGS2Q68CL5 300 aa18.85■□□□□ 0.61
TRIM56-203ENST00000467847 TPRG1Q6ZUI0 275 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms