RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 DNAI2Q9GZS0 605 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 TBC1D22BQ9NU19 505 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 AIPL1Q9NZN9 384 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 SPATA7Q9P0W8 599 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 PDP2Q9P2J9 529 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 DKK3Q9UBP4 350 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 MCM8Q9UJA3 840 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 EPN1Q9Y6I3 576 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-212ENST00000466845 ARHGAP5Q13017 1502 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 FYCO1Q9BQS8 1478 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 A0A1B0GVC2 190 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 KIF2AO00139 706 aaPredicted RBP6.3□□□□□ -1.4
LRCH3-212ENST00000466845 CASQ2O14958 399 aaPredicted RBP6.3□□□□□ -1.4
LRCH3-212ENST00000466845 GSTA4O15217 222 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 TIPRLO75663 272 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 MBD4O95243 580 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 SOD2P04179 222 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 ZNF28P17035 718 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 IL13P35225 146 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 ATP6V1E1P36543 226 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 MTHFRP42898 656 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 KIF11P52732 1056 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 EPHA5P54756 1037 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 AP2B1P63010 937 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 NFKB2Q00653 900 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 AKAP17AQ02040 695 aaKnown RBP6.3□□□□□ -1.4
LRCH3-212ENST00000466845 ADCY2Q08462 1091 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 EFEMP1Q12805 493 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 SP140Q13342 867 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 CNGA3Q16281 694 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 NTRK3Q16288 839 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 TUBB8Q3ZCM7 444 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 GPATCH4Q5T3I0 446 aaKnown RBP6.3□□□□□ -1.4
LRCH3-212ENST00000466845 PRAMEF18Q5VWM3 479 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 TATDN1Q6P1N9 297 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 XRRA1Q6P2D8 792 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 CRTC1Q6UUV9 634 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 LDHAL6AQ6ZMR3 332 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 RAPH1Q70E73 1250 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 RNF168Q8IYW5 571 aaPredicted RBP6.3□□□□□ -1.4
LRCH3-212ENST00000466845 NLGN4XQ8N0W4 816 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 LRRC43Q8N309 656 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 TXNDC5Q8NBS9 432 aaKnown RBP6.3□□□□□ -1.4
LRCH3-212ENST00000466845 NAXEQ8NCW5 288 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 CFAP36Q96G28 342 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 LRRCC1Q9C099 1032 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 TMEM168Q9H0V1 697 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 CCDC68Q9H2F9 335 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 ELAC1Q9H777 363 aaKnown RBP6.3□□□□□ -1.4
LRCH3-212ENST00000466845 L2HGDHQ9H9P8 463 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 STARD7Q9NQZ5 370 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 NKIRAS2Q9NYR9 191 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 LUC7L2Q9Y383 392 aaKnown RBP6.3□□□□□ -1.4
LRCH3-212ENST00000466845 CD2APQ9Y5K6 639 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 TROQ12816 1431 aaPredicted RBP6.3□□□□□ -1.4
LRCH3-212ENST00000466845 RICTORQ6R327 1708 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 ZFYVE16Q7Z3T8 1539 aa6.3□□□□□ -1.4
LRCH3-212ENST00000466845 ITIH6Q6UXX5 1313 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 TRBV23-1A0A0A0MS06 115 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 K7ESM1 405 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 DDX3XO00571 662 aaKnown RBP eCLIP6.29□□□□□ -1.4
LRCH3-212ENST00000466845 WNT9AO14904 365 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 PRICKLE3O43900 615 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-212ENST00000466845 PAHP00439 452 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 PLATP00750 562 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 CD4P01730 458 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 CYP1A1P04798 512 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-212ENST00000466845 ADRB1P08588 477 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 ENO2P09104 434 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-212ENST00000466845 HSPA1AP0DMV8 641 aaKnown RBP6.29□□□□□ -1.4
LRCH3-212ENST00000466845 HSPA1BP0DMV9 641 aaKnown RBP6.29□□□□□ -1.4
LRCH3-212ENST00000466845 GNAT2P19087 354 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 XPAP23025 273 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-212ENST00000466845 CNR2P34972 360 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 CCT5P48643 541 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 IRX1P78414 480 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-212ENST00000466845 MPP1Q00013 466 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 CYP4A11Q02928 519 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 SSRP1Q08945 709 aaKnown RBP6.29□□□□□ -1.4
LRCH3-212ENST00000466845 PAK1Q13153 545 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 C21orf62-AS1Q17RA5 79 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 TM4SF20Q53R12 229 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 HECTD3Q5T447 861 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 VPS53Q5VIR6 699 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 SFMBT2Q5VUG0 894 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 SPATA1Q5VX52 437 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 VASNQ6EMK4 673 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 KCNT2Q6UVM3 1135 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 RUFY3Q7L099 469 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 POGZQ7Z3K3 1410 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 PRRT2Q7Z6L0 340 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-212ENST00000466845 LURAP1LQ8IV03 231 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 PEX5LQ8IYB4 626 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 SLC7A5P1Q8MH63 180 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 UBR7Q8N806 425 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 MSANTD4Q8NCY6 345 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 CASKIN1Q8WXD9 1431 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 CAMKK2Q96RR4 588 aa6.29□□□□□ -1.4
LRCH3-212ENST00000466845 SMAD5Q99717 465 aaKnown RBP6.29□□□□□ -1.4
LRCH3-212ENST00000466845 SH3GL1Q99961 368 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms