RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 EDARQ9UNE0 448 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 ENTPD2Q9Y5L3 495 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 COL3A1P02461 1466 aaPredicted RBP3.17□□□□□ -1.9
CCDC93-205ENST00000466171 GSG1L2A8MUP6 293 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 YY2O15391 372 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 CDC45O75419 566 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 WT1P19544 449 aaPredicted RBP3.17□□□□□ -1.9
CCDC93-205ENST00000466171 ALDH1A3P47895 512 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 CCT2P78371 535 aaKnown RBP3.17□□□□□ -1.9
CCDC93-205ENST00000466171 MAPK7Q13164 816 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 ADRM1Q16186 407 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 GEN1Q17RS7 908 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 ANO4Q32M45 955 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 TKFCQ3LXA3 575 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 CCDC144BQ3MJ40 725 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 FAM153CQ494X1 144 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 TAF7LQ5H9L4 462 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 KAZNQ674X7 775 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 Q6ZVL8 140 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 SEM1Q6ZVN7 128 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 C1QL2Q7Z5L3 287 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 ZNF366Q8N895 744 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 HASPINQ8TF76 798 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 STON2Q8WXE9 905 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 SARAFQ96BY9 339 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 CYFIP2Q96F07 1278 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 MARS2Q96GW9 593 aaKnown RBP3.17□□□□□ -1.9
CCDC93-205ENST00000466171 RNPC3Q96LT9 517 aaKnown RBP3.17□□□□□ -1.9
CCDC93-205ENST00000466171 ACE2Q9BYF1 805 aaPredicted RBP3.17□□□□□ -1.9
CCDC93-205ENST00000466171 IFT22Q9H7X7 185 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 IFT122Q9HBG6 1241 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 IL17RBQ9NRM6 502 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 TOPORSQ9NS56 1045 aaPredicted RBP3.17□□□□□ -1.9
CCDC93-205ENST00000466171 ZNF70Q9UC06 446 aaPredicted RBP3.17□□□□□ -1.9
CCDC93-205ENST00000466171 SIK3Q9Y2K2 1263 aa3.17□□□□□ -1.9
CCDC93-205ENST00000466171 WDR91A4D1P6 747 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 GOLGA8AA7E2F4 631 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 MPPED1O15442 326 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 ZEB2O60315 1214 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 ONECUT2O95948 504 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 SRGNP10124 158 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 SLC6A2P23975 617 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 GUCY1A2P33402 732 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 GRIA3P42263 894 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 CREMQ03060 361 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 NOMO1Q15155 1222 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 SF3B3Q15393 1217 aaKnown RBP3.16□□□□□ -1.9
CCDC93-205ENST00000466171 UBE3BQ7Z3V4 1068 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 NLGN4YQ8NFZ3 816 aaPredicted RBP3.16□□□□□ -1.9
CCDC93-205ENST00000466171 FBXL20Q96IG2 436 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 ZNF778Q96MU6 729 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 TTC1Q99614 292 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 QRSL1Q9H0R6 528 aaKnown RBP3.16□□□□□ -1.9
CCDC93-205ENST00000466171 MANSC1Q9H8J5 431 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 FBXO34Q9NWN3 711 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 AJAP1Q9UKB5 411 aaPredicted RBP3.16□□□□□ -1.9
CCDC93-205ENST00000466171 MAPRE3Q9UPY8 281 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 APOBEC2Q9Y235 224 aaKnown RBP3.16□□□□□ -1.9
CCDC93-205ENST00000466171 NEU2Q9Y3R4 380 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 WNT6Q9Y6F9 365 aa3.16□□□□□ -1.9
CCDC93-205ENST00000466171 CGB1A6NKQ9 187 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 FAM171A2A8MVW0 826 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 GPR32O75388 356 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 PRSS23O95084 383 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 PRKCGP05129 697 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 BPIP17213 487 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 EXOSC10Q01780 885 aaKnown RBP3.15□□□□□ -1.91
CCDC93-205ENST00000466171 FPGSQ05932 587 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 DHCR24Q15392 516 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 MUM1Q2TAK8 710 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 TSTD2Q5T7W7 516 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 KIAA0895LQ68EN5 471 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 VWA1Q6PCB0 445 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 CLNKQ7Z7G1 428 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 PEG10Q86TG7 708 aaKnown RBP3.15□□□□□ -1.91
CCDC93-205ENST00000466171 C9orf106Q8NAJ2 232 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 TBC1D15Q8TC07 691 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 UBXN4Q92575 508 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 PGBD1Q96JS3 809 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 GSTO2Q9H4Y5 243 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 LDAHQ9H6V9 325 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 INTS13Q9NVM9 706 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 ACTL7AQ9Y615 435 aa3.15□□□□□ -1.91
CCDC93-205ENST00000466171 CCDC78A2IDD5 438 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 CDHR4A6H8M9 788 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 MANSC4A6NHS7 340 aaPredicted RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 GCOM1H8Y6P7 765 aaPredicted RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 PDE8AO60658 829 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 CELA2AP08217 269 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 MYCLP1P12525 358 aaPredicted RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 GSPT1P15170 499 aaKnown RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 PTGER1P34995 402 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 SLC5A3P53794 718 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 PROK1P58294 105 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 RPS7P62081 194 aaKnown RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 NOMO3P69849 1222 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 FAPQ12884 760 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 SLC10A2Q12908 348 aaPredicted RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 MALLQ13021 153 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 GRM1Q13255 1194 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms