RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 MYCLP12524 364 aaPredicted RBP7.3□□□□□ -1.24
TPM3-214ENST00000466010 HOXC12P31275 282 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 ICAM3P32942 547 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 EPHB4P54760 987 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 AUHQ13825 339 aaKnown RBP7.3□□□□□ -1.24
TPM3-214ENST00000466010 SETDB1Q15047 1291 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 SEPT7Q16181 437 aaKnown RBP7.3□□□□□ -1.24
TPM3-214ENST00000466010 NKG7Q16617 165 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 PTGISQ16647 500 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 GFOD2Q3B7J2 385 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 LONRF3Q496Y0 759 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 CDCA2Q69YH5 1023 aaPredicted RBP7.3□□□□□ -1.24
TPM3-214ENST00000466010 MCTP2Q6DN12 878 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 METTL7BQ6UX53 244 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 LHFPL2Q6ZUX7 228 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 ZNF365Q70YC5 407 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 Q7L0L9 218 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 CHST3Q7LGC8 479 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 DDX53Q86TM3 631 aaKnown RBP7.3□□□□□ -1.24
TPM3-214ENST00000466010 NLRX1Q86UT6 975 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 ARHGEF39Q8N4T4 335 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 CNTD1Q8N815 330 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 PHOSPHO2Q8TCD6 241 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 TBC1D5Q92609 795 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 TNPO1Q92973 898 aaKnown RBP7.3□□□□□ -1.24
TPM3-214ENST00000466010 TIFAQ96CG3 184 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 SPATA33Q96N06 139 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 FANCD2OSQ96PS1 177 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 LGR4Q9BXB1 951 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 SEMA6BQ9H3T3 888 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 GP6Q9HCN6 339 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 SSU72Q9NP77 194 aaKnown RBP7.3□□□□□ -1.24
TPM3-214ENST00000466010 TRMT13Q9NUP7 481 aaKnown RBP7.3□□□□□ -1.24
TPM3-214ENST00000466010 CGGBP1Q9UFW8 167 aaPredicted RBP7.3□□□□□ -1.24
TPM3-214ENST00000466010 GTF2IRD1Q9UHL9 959 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 ZNF215Q9UL58 517 aaPredicted RBP7.3□□□□□ -1.24
TPM3-214ENST00000466010 PCDHB12Q9Y5F1 795 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 SLC4A7Q9Y6M7 1214 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 CHD9Q3L8U1 2897 aa7.3□□□□□ -1.24
TPM3-214ENST00000466010 SCN10AQ9Y5Y9 1956 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 KIF28PB7ZC32 967 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 ZBTB43O43298 467 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 GGPS1O95749 300 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 SNRPB2P08579 225 aaKnown RBP7.29□□□□□ -1.24
TPM3-214ENST00000466010 FOSL2P15408 326 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 UBA1P22314 1058 aaKnown RBP7.29□□□□□ -1.24
TPM3-214ENST00000466010 PSMA5P28066 241 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 NTF4P34130 210 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 CCL23P55773 120 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 GRB10Q13322 594 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 KIAA0753Q2KHM9 967 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 TMEM63BQ5T3F8 832 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 PIK3R6Q5UE93 754 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 ERICH6BQ5W0A0 696 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 APOA5Q6Q788 366 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 FAM43BQ6ZT52 329 aaPredicted RBP7.29□□□□□ -1.24
TPM3-214ENST00000466010 TMTC3Q6ZXV5 915 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 C16orf59Q7L2K0 433 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 MICU3Q86XE3 530 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 KIF18BQ86Y91 864 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 FBXL16Q8N461 479 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 MFSD2AQ8NA29 543 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 CCDC12Q8WUD4 166 aaPredicted RBP7.29□□□□□ -1.24
TPM3-214ENST00000466010 COPS5Q92905 334 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 GUCD1Q96NT3 240 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 CDX2Q99626 313 aaPredicted RBP7.29□□□□□ -1.24
TPM3-214ENST00000466010 FOXQ1Q9C009 403 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 ZNF700Q9H0M5 742 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 WNT8AQ9H1J5 351 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 SLC28A3Q9HAS3 691 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 LUC7LQ9NQ29 371 aaKnown RBP7.29□□□□□ -1.24
TPM3-214ENST00000466010 FBXL21Q9UKT6 434 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 STARD13Q9Y3M8 1113 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 PCDHA11Q9Y5I1 949 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 TAF6LQ9Y6J9 622 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 MYH6P13533 1939 aa7.29□□□□□ -1.24
TPM3-214ENST00000466010 TCRBV16S1A1N1A0A5B0 115 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 HMGB1P1B2RPK0 211 aaPredicted RBP7.28□□□□□ -1.24
TPM3-214ENST00000466010 M0R082 166 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 HAS3O00219 553 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 MEIS2O14770 477 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 GFRA3O60609 400 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 RFPL1O75677 317 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 FBXO21O94952 628 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 IQCF3P0C7M6 154 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 CYP2C9P11712 490 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 ATP2A2P16615 1042 aaKnown RBP7.28□□□□□ -1.24
TPM3-214ENST00000466010 BPIP17213 487 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 GFRA1P56159 465 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 SLBPQ14493 270 aaKnown RBP eCLIP7.28□□□□□ -1.24
TPM3-214ENST00000466010 SLC35G1Q2M3R5 365 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 SYCP2LQ5T4T6 812 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 GTF2IRD2BQ6EKJ0 949 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 ZCCHC8Q6NZY4 707 aaKnown RBP7.28□□□□□ -1.24
TPM3-214ENST00000466010 LRRC8DQ7L1W4 858 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 OTOP2Q7RTS6 562 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 GTF2IRD2Q86UP8 949 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 SRBD1Q8N5C6 995 aaKnown RBP7.28□□□□□ -1.24
TPM3-214ENST00000466010 GALNT11Q8NCW6 608 aa7.28□□□□□ -1.24
TPM3-214ENST00000466010 ZNF417Q8TAU3 575 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms