RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 NFIL3Q16649 462 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 ZCWPW2Q504Y3 356 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 TAS1R1Q7RTX1 841 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 TMC7Q7Z402 723 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 TMEM130Q8N3G9 435 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 MRPL43Q8N983 215 aaKnown RBP22.05■■□□□ 1.12
SKA3-205ENST00000465471 XXYLT1Q8NBI6 393 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 HASPINQ8TF76 798 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 FAM212AQ96EL1 285 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 MAPK8IP1Q9UQF2 711 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 ZNF233A6NK53 670 aa22.04■■□□□ 1.12
SKA3-205ENST00000465471 TADA2AO75478 443 aa22.04■■□□□ 1.12
SKA3-205ENST00000465471 B3GAT3O94766 335 aa22.04■■□□□ 1.12
SKA3-205ENST00000465471 CYP2J2P51589 502 aa22.04■■□□□ 1.12
SKA3-205ENST00000465471 MYBPC2Q14324 1141 aa22.04■■□□□ 1.12
SKA3-205ENST00000465471 SNRNP35Q16560 246 aaKnown RBP22.04■■□□□ 1.12
SKA3-205ENST00000465471 GPR65Q8IYL9 337 aa22.04■■□□□ 1.12
SKA3-205ENST00000465471 MICAL1Q8TDZ2 1067 aa22.04■■□□□ 1.12
SKA3-205ENST00000465471 PPM1EQ8WY54 764 aa22.04■■□□□ 1.12
SKA3-205ENST00000465471 XIRP2A4UGR9 3374 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 BMP6P22004 513 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 PRCPP42785 496 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 GUCY2FP51841 1108 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 DSG1Q02413 1049 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 ELAVL2Q12926 359 aaKnown RBP22.03■■□□□ 1.12
SKA3-205ENST00000465471 MORC3Q14149 939 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 DUSP6Q16828 381 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 CTC1Q2NKJ3 1217 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 KIAA0319Q5VV43 1072 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 BEST2Q8NFU1 509 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 AUTS2Q8WXX7 1259 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 PPP2R3CQ969Q6 453 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 CLSTN2Q9H4D0 955 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 PDE11AQ9HCR9 933 aa22.03■■□□□ 1.12
SKA3-205ENST00000465471 ANO9A1A5B4 782 aa22.02■■□□□ 1.12
SKA3-205ENST00000465471 CXCL14O95715 111 aa22.02■■□□□ 1.12
SKA3-205ENST00000465471 NR3C1P04150 777 aa22.02■■□□□ 1.12
SKA3-205ENST00000465471 GLUD2P49448 558 aa22.02■■□□□ 1.12
SKA3-205ENST00000465471 BMS1Q14692 1282 aaKnown RBP22.02■■□□□ 1.12
SKA3-205ENST00000465471 USP41Q3LFD5 358 aa22.02■■□□□ 1.12
SKA3-205ENST00000465471 ADSSL1Q8N142 457 aa22.02■■□□□ 1.12
SKA3-205ENST00000465471 MFSD14AQ96MC6 490 aa22.02■■□□□ 1.12
SKA3-205ENST00000465471 CDCA3Q99618 268 aaPredicted RBP22.02■■□□□ 1.12
SKA3-205ENST00000465471 GZF1Q9H116 711 aaPredicted RBP22.02■■□□□ 1.12
SKA3-205ENST00000465471 KIAA1468Q9P260 1216 aa22.02■■□□□ 1.12
SKA3-205ENST00000465471 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.01■■□□□ 1.11
SKA3-205ENST00000465471 GOLGA6L22H0YM25 854 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 NCK2O43639 380 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 CALUO43852 315 aaPredicted RBP22.01■■□□□ 1.11
SKA3-205ENST00000465471 URODP06132 367 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 FGFR3P22607 806 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 GTF2F1P35269 517 aaKnown RBP eCLIP22.01■■□□□ 1.11
SKA3-205ENST00000465471 NRIP1P48552 1158 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 AARSP49588 968 aaKnown RBP eCLIP22.01■■□□□ 1.11
SKA3-205ENST00000465471 CYP24A1Q07973 514 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 KCNC3Q14003 757 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 PSMD6Q15008 389 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 SURF1Q15526 300 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 CAMK4Q16566 473 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 EDRF1Q3B7T1 1238 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 RTP2Q5QGT7 225 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 CENPPQ6IPU0 288 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.01■■□□□ 1.11
SKA3-205ENST00000465471 EFHBQ8N7U6 833 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 CXorf38Q8TB03 319 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 GPT2Q8TD30 523 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 NOC3LQ8WTT2 800 aaKnown RBP22.01■■□□□ 1.11
SKA3-205ENST00000465471 PABPC5Q96DU9 382 aaKnown RBP22.01■■□□□ 1.11
SKA3-205ENST00000465471 B3GALT6Q96L58 329 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 TLE6Q9H808 572 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 SSX2IPQ9Y2D8 614 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 PTPRJQ12913 1337 aa22.01■■□□□ 1.11
SKA3-205ENST00000465471 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22■■□□□ 1.11
SKA3-205ENST00000465471 FSD2A1L4K1 749 aa22■■□□□ 1.11
SKA3-205ENST00000465471 PIRO00625 290 aa22■■□□□ 1.11
SKA3-205ENST00000465471 PPEF2O14830 753 aa22■■□□□ 1.11
SKA3-205ENST00000465471 EXOC3O60645 756 aa22■■□□□ 1.11
SKA3-205ENST00000465471 BRCC3P46736 316 aa22■■□□□ 1.11
SKA3-205ENST00000465471 C9orf57Q5W0N0 161 aa22■■□□□ 1.11
SKA3-205ENST00000465471 TRIML1Q8N9V2 468 aa22■■□□□ 1.11
SKA3-205ENST00000465471 RXFP1Q9HBX9 757 aa22■■□□□ 1.11
SKA3-205ENST00000465471 PRDM6Q9NQX0 595 aa22■■□□□ 1.11
SKA3-205ENST00000465471 MRPL17Q9NRX2 175 aaKnown RBP22■■□□□ 1.11
SKA3-205ENST00000465471 DPP3Q9NY33 737 aa22■■□□□ 1.11
SKA3-205ENST00000465471 SCN1AP35498 2009 aa22■■□□□ 1.11
SKA3-205ENST00000465471 TRAPPC3O43617 180 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 GLP2RO95838 553 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 CD44P16070 742 aaKnown RBP21.99■■□□□ 1.11
SKA3-205ENST00000465471 ADAM15Q13444 863 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 FAM171A1Q5VUB5 890 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 RBM23Q86U06 439 aaKnown RBP21.99■■□□□ 1.11
SKA3-205ENST00000465471 WDR49Q8IV35 697 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 C1orf127Q8N9H9 656 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 RDH13Q8NBN7 331 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 VN1R2Q8NFZ6 395 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 PLEKHO2Q8TD55 490 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 PIK3R5Q8WYR1 880 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 SUSD3Q96L08 255 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 TTPALQ9BTX7 342 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 INTS13Q9NVM9 706 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms