RNA–Protein interactions for RNA: ENST00000465415.1

CNKSR1-203, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-203ENST00000465415 EPM2AIP1Q7L775 607 aaPredicted RBP13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 CEP57Q86XR8 500 aa13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 CD302Q8IX05 232 aa13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 GPR65Q8IYL9 337 aa13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 SAAL1Q96ER3 474 aa13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 TSPAN18Q96SJ8 248 aa13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 CBWD1Q9BRT8 395 aa13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 FAM213AQ9BRX8 229 aa13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 TTPALQ9BTX7 342 aa13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 SLC39A2Q9NP94 309 aa13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 NUB1Q9Y5A7 615 aa13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 SPTBN5Q9NRC6 3674 aaKnown RBP13.65□□□□□ -0.22
CNKSR1-203ENST00000465415 VCANP13611 3396 aa13.65□□□□□ -0.23
CNKSR1-203ENST00000465415 PDCD11Q14690 1871 aaKnown RBP13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 TEX28O15482 410 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 MBTPS2O43462 519 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 KLRC4O43908 158 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 ZNF202O95125 648 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 NFICP08651 508 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 EPCAMP16422 314 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 HOXB8P17481 243 aaPredicted RBP13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 IGFBP6P24592 240 aaPredicted RBP13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 BRCC3P46736 316 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 CLCN4P51793 760 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 POU5F1Q01860 360 aaKnown RBP13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 TMEM132DQ14C87 1099 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 ZBTB6Q15916 424 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 PRSS55Q6UWB4 352 aaPredicted RBP13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 KRBA2Q6ZNG9 492 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 NELFCDQ8IXH7 590 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 BEST2Q8NFU1 509 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 ZNF507Q8TCN5 953 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 NOC3LQ8WTT2 800 aaKnown RBP13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 SLC22A17Q8WUG5 538 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 SCFD1Q8WVM8 642 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 PIK3R5Q8WYR1 880 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 NECAB3Q96P71 396 aaPredicted RBP13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 ASB7Q9H672 318 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 RXFP1Q9HBX9 757 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 DZANK1Q9NVP4 752 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 CHMP5Q9NZZ3 219 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 DERAQ9Y315 318 aa13.64□□□□□ -0.23
CNKSR1-203ENST00000465415 SPDYE4A6NLX3 237 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 I3L4J1 428 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 KIAA0391O15091 583 aaKnown RBP13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 IL18RAPO95256 599 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 LDHAP00338 332 aaKnown RBP13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 GLUD1P00367 558 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 PRR29P0C7W0 189 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 CYP3A5P20815 502 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 FGFR3P22607 806 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 LRPAP1P30533 357 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 MCM4P33991 863 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 HOXD13P35453 343 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 GUCY2FP51841 1108 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 SMAD2Q15796 467 aaKnown RBP13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 PSMD5Q16401 504 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 KMT5BQ4FZB7 885 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 SPATA1Q5VX52 437 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 PDXDC1Q6P996 788 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 SYCE2Q6PIF2 218 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 CD300LGQ6UXG3 332 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 CRELD2Q6UXH1 353 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 HS2ST1Q7LGA3 356 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 BRSK2Q8IWQ3 736 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 CCDC47Q96A33 483 aaKnown RBP13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 FBXL18Q96ME1 805 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 APOL5Q9BWW9 433 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 PCIF1Q9H4Z3 704 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 AGPAT3Q9NRZ7 376 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 RBAKQ9NYW8 714 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 FNIP2Q9P278 1114 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 C2CD2Q9Y426 696 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 USP15Q9Y4E8 981 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 TRIP11Q15643 1979 aa13.63□□□□□ -0.23
CNKSR1-203ENST00000465415 GOLGA8IPA6NC78 632 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 GOLGA8JA6NMD2 632 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 TULP1O00294 542 aaPredicted RBP13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 EXTL3O43909 919 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 RPN1P04843 607 aaKnown RBP13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 RPL17P18621 184 aaKnown RBP13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 TKTP29401 623 aaKnown RBP13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 PSMD2Q13200 908 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 BMT2Q1RMZ1 405 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 KANK3Q6NY19 840 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 ELMSAN1Q6PJG2 1045 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 GLYCTKQ8IVS8 523 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 FMR1NBQ8N0W7 255 aaPredicted RBP13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 GPD1LQ8N335 351 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 TMEM130Q8N3G9 435 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 KIAA0895Q8NCT3 520 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 ZSWIM2Q8NEG5 633 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 LNX1Q8TBB1 728 aaPredicted RBP13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 SFXN1Q9H9B4 322 aa13.62□□□□□ -0.23
CNKSR1-203ENST00000465415 TTC28Q96AY4 2481 aa13.61□□□□□ -0.23
CNKSR1-203ENST00000465415 SYN3O14994 580 aa13.61□□□□□ -0.23
CNKSR1-203ENST00000465415 TGFB1I1O43294 461 aa13.61□□□□□ -0.23
CNKSR1-203ENST00000465415 SNRPFP62306 86 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms