RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 TCEAL4Q96EI5 215 aa12.02□□□□□ -0.49
COL11A1-207ENST00000465209 ACO2Q99798 780 aaKnown RBP12.02□□□□□ -0.49
COL11A1-207ENST00000465209 BCO2Q9BYV7 579 aa12.02□□□□□ -0.49
COL11A1-207ENST00000465209 BHMT2Q9H2M3 363 aa12.02□□□□□ -0.49
COL11A1-207ENST00000465209 SPATA6Q9NWH7 488 aaPredicted RBP12.02□□□□□ -0.49
COL11A1-207ENST00000465209 PCDHGA2Q9Y5H1 932 aa12.02□□□□□ -0.49
COL11A1-207ENST00000465209 SPTBN2O15020 2390 aa12.02□□□□□ -0.49
COL11A1-207ENST00000465209 KIF26AQ9ULI4 1882 aaPredicted RBP12.02□□□□□ -0.49
COL11A1-207ENST00000465209 KMT2BQ9UMN6 2715 aaPredicted RBP12.01□□□□□ -0.49
COL11A1-207ENST00000465209 PODXLO00592 558 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 LAMTOR5O43504 91 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 MOSPD3O75425 235 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 SEC24AO95486 1093 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 ATF2P15336 505 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 TGM1P22735 817 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 NPTX2P47972 431 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 MAPK7Q13164 816 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 TRIM29Q14134 588 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 NBR1Q14596 966 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 PUM1Q14671 1186 aaKnown RBP eCLIP12.01□□□□□ -0.49
COL11A1-207ENST00000465209 VARS2Q5ST30 1063 aaKnown RBP12.01□□□□□ -0.49
COL11A1-207ENST00000465209 HAUS3Q68CZ6 603 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 DGLUCYQ7Z3D6 616 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 IGSF22Q8N9C0 903 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 ERMNQ8TAM6 284 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 DNASE1L2Q92874 299 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 ELSPBP1Q96BH3 223 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 MCRS1Q96EZ8 462 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 BORCS6Q96GS4 357 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 EPC1Q9H2F5 836 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 FOXP1Q9H334 677 aaPredicted RBP12.01□□□□□ -0.49
COL11A1-207ENST00000465209 HEBP1Q9NRV9 189 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 CNTN3Q9P232 1028 aa12.01□□□□□ -0.49
COL11A1-207ENST00000465209 MRPS23Q9Y3D9 190 aaKnown RBP12.01□□□□□ -0.49
COL11A1-207ENST00000465209 NUP210Q8TEM1 1887 aaPredicted RBP12.01□□□□□ -0.49
COL11A1-207ENST00000465209 ANK1P16157 1881 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 SYN3O14994 580 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 MICAL2O94851 1124 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 KCNE1P15382 129 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 NEK4P51957 841 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 TMEM132AQ24JP5 1023 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 TTC38Q5R3I4 469 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 TCEAL8Q8IYN2 117 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 TMEM130Q8N3G9 435 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 FBXO18Q8NFZ0 1043 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 C18orf25Q96B23 403 aaPredicted RBP12□□□□□ -0.49
COL11A1-207ENST00000465209 IFT74Q96LB3 600 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 ASB16Q96NS5 453 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 TMEM134Q9H6X4 195 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 ZSCAN32Q9NX65 697 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 INSL5Q9Y5Q6 135 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 EPG5Q9HCE0 2579 aa12□□□□□ -0.49
COL11A1-207ENST00000465209 TPRP12270 2363 aaKnown RBP11.99□□□□□ -0.49
COL11A1-207ENST00000465209 K7ERI5 159 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 ARNTLO00327 626 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 TRAPPC3O43617 180 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 VNN2O95498 520 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 PTPN2P17706 415 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 CCT6AP40227 531 aaKnown RBP11.99□□□□□ -0.49
COL11A1-207ENST00000465209 TRAPPC10P48553 1259 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 TOB1P50616 345 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-207ENST00000465209 EPHA5P54756 1037 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 PEX3P56589 373 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 CSTF1Q05048 431 aaKnown RBP11.99□□□□□ -0.49
COL11A1-207ENST00000465209 MTAPQ13126 283 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 ZNF568Q3ZCX4 644 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 FAM78AQ5JUQ0 283 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 ZBTB41Q5SVQ8 909 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 TSSK4Q6SA08 328 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 KCNK18Q7Z418 384 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 MAP4K3Q8IVH8 894 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 C8orf76Q96K31 380 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 SUSD3Q96L08 255 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 HINFPQ9BQA5 517 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 MMTAG2Q9BU76 263 aaKnown RBP11.99□□□□□ -0.49
COL11A1-207ENST00000465209 RUSC1Q9BVN2 902 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 TARS2Q9BW92 718 aaKnown RBP11.99□□□□□ -0.49
COL11A1-207ENST00000465209 TOPORSQ9NS56 1045 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-207ENST00000465209 DDX19AQ9NUU7 478 aaKnown RBP11.99□□□□□ -0.49
COL11A1-207ENST00000465209 FBXL5Q9UKA1 691 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 SMG5Q9UPR3 1016 aaKnown RBP11.99□□□□□ -0.49
COL11A1-207ENST00000465209 KIAA1024Q9UPX6 916 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 CACNA1BQ00975 2339 aa11.99□□□□□ -0.49
COL11A1-207ENST00000465209 E9PMD0 336 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 HIP1RO75146 1068 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 LRG1P02750 347 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 MCF2P10911 925 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 OSTNP61366 133 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 ADCY1Q08828 1119 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 GRM2Q14416 872 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 PDIA5Q14554 519 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 SAFBQ15424 915 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL11A1-207ENST00000465209 IL17AQ16552 155 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 RSPO4Q2I0M5 234 aaPredicted RBP11.98□□□□□ -0.49
COL11A1-207ENST00000465209 TPGS2Q68CL5 300 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 VITQ6UXI7 678 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 ZNF852Q6ZMS4 543 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 MAMSTRQ6ZN01 415 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 C1orf186Q6ZWK4 172 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 CCDC83Q8IWF9 413 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms