RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 FZD5Q13467 585 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 TRIM29Q14134 588 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 ANKRD1Q15327 319 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 PRSS36Q5K4E3 855 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 SLC8B1Q6J4K2 584 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 CD300LGQ6UXG3 332 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 ERMNQ8TAM6 284 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 IFT74Q96LB3 600 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 CORO1BQ9BR76 489 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 IER2Q9BTL4 223 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 KIFC3Q9BVG8 833 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 TRMT61BQ9BVS5 477 aaKnown RBP16.06■□□□□ 0.16
MCF2L-220ENST00000464800 TMEM60Q9H2L4 133 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 CHRDQ9H2X0 955 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 RAB23Q9ULC3 237 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 SPTBN2O15020 2390 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 KMT2BQ9UMN6 2715 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-220ENST00000464800 WDR27A2RRH5 827 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 ZNF197O14709 1029 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 ABLIM3O94929 683 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 MCM7P33993 719 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 FOSBP53539 338 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 YARSP54577 528 aaKnown RBP16.05■□□□□ 0.16
MCF2L-220ENST00000464800 FAM78AQ5JUQ0 283 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 POTEHQ6S545 545 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 IRF7Q92985 503 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 TCEAL4Q96EI5 215 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 CYP4F11Q9HBI6 524 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 TOPORSQ9NS56 1045 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-220ENST00000464800 SLC38A7Q9NVC3 462 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 INSL5Q9Y5Q6 135 aa16.05■□□□□ 0.16
MCF2L-220ENST00000464800 TPRP12270 2363 aaKnown RBP16.05■□□□□ 0.16
MCF2L-220ENST00000464800 SMIM28A0A1B0GU29 152 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 KRT37O76014 449 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 MICAL2O94851 1124 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 TDGF1P13385 188 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 ATF2P15336 505 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 TGM1P22735 817 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 RPA1P27694 616 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 ARPP19P56211 112 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 SOX4Q06945 474 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-220ENST00000464800 NT5DC1Q5TFE4 455 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 LAIR1Q6GTX8 287 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 PDZD4Q76G19 769 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-220ENST00000464800 TCEAL8Q8IYN2 117 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 ZNF687Q8N1G0 1237 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 ELMOD1Q8N336 334 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 NECAB1Q8N987 351 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 KIFAP3Q92845 792 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 GTF3C6Q969F1 213 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 ASB16Q96NS5 453 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 CCDC94Q9BW85 323 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-220ENST00000464800 PARD6AQ9NPB6 346 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 ACACBO00763 2458 aa16.04■□□□□ 0.16
MCF2L-220ENST00000464800 F5P12259 2224 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 DCDC2BA2VCK2 349 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 H7C4K7 107 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 PODXLO00592 558 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 SYN3O14994 580 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 PSMC3P17980 439 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 GRM5P41594 1212 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 CCR3P51677 355 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 SPEM2Q0P670 501 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 LPAL2Q16609 132 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 ZNF568Q3ZCX4 644 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 CYP4A22Q5TCH4 519 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 HAUS3Q68CZ6 603 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 MAMSTRQ6ZN01 415 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 NSUN7Q8NE18 718 aaKnown RBP16.03■□□□□ 0.16
MCF2L-220ENST00000464800 FAM3CQ92520 227 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 SMARCD2Q92925 531 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 ZNF334Q9HCZ1 680 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-220ENST00000464800 TRPV5Q9NQA5 729 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 TNFSF13BQ9Y275 285 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 PIAS3Q9Y6X2 628 aa16.03■□□□□ 0.16
MCF2L-220ENST00000464800 RALGAPA1Q6GYQ0 2036 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 PHLPP2Q6ZVD8 1323 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 K7ERI5 159 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 OR52Z1P0C646 297 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 MUTP22033 750 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 GDI1P31150 447 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 CCR2P41597 374 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 OSTNP61366 133 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 TPGS2Q68CL5 300 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 IQCEQ6IPM2 695 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 VITQ6UXI7 678 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 PRR23BQ6ZRT6 265 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 MAP4K3Q8IVH8 894 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 CELF5Q8N6W0 485 aaKnown RBP16.02■□□□□ 0.16
MCF2L-220ENST00000464800 CEP120Q8N960 986 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 DEPDC1BQ8WUY9 529 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 CDT1Q9H211 546 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 FBXL5Q9UKA1 691 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 NUB1Q9Y5A7 615 aa16.02■□□□□ 0.16
MCF2L-220ENST00000464800 LARGE1O95461 756 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 SEC24AO95486 1093 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 ME3Q16798 604 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 CTXN3Q4LDR2 81 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 XKR4Q5GH76 650 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 ZNF280DQ6N043 979 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms