RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ST13P5Q8NFI4 369 aaPredicted RBP20.58■□□□□ 0.89
SF3A1-205ENST00000463818 KCNN1Q92952 543 aa20.58■□□□□ 0.89
SF3A1-205ENST00000463818 IRF2BPLQ9H1B7 796 aa20.58■□□□□ 0.89
SF3A1-205ENST00000463818 PLEKHA5Q9HAU0 1116 aa20.58■□□□□ 0.89
SF3A1-205ENST00000463818 TBX20Q9UMR3 447 aa20.58■□□□□ 0.89
SF3A1-205ENST00000463818 CLIC4Q9Y696 253 aa20.58■□□□□ 0.89
SF3A1-205ENST00000463818 C2orf16Q68DN1 1984 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 ANHXE9PGG2 379 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 SYN3O14994 580 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 CFHP08603 1231 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 DDIT3P35638 169 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 ZNF131P52739 623 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 SPAG1Q07617 926 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 RTL10Q7L3V2 364 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 SIX5Q8N196 739 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 ATOH1Q92858 354 aaPredicted RBP20.57■□□□□ 0.88
SF3A1-205ENST00000463818 CCSER1Q9C0I3 900 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 ZHX3Q9H4I2 956 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 PARVGQ9HBI0 331 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 WNT16Q9UBV4 365 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 CDH7Q9ULB5 785 aa20.57■□□□□ 0.88
SF3A1-205ENST00000463818 ZFP37Q9Y6Q3 630 aaPredicted RBP20.57■□□□□ 0.88
SF3A1-205ENST00000463818 DENND4AQ7Z401 1863 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 H0Y858 1186 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 H7C4K7 107 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 PI15O43692 258 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 TRAK2O60296 914 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 TBC1D4O60343 1298 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 POU2F2P09086 479 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 CXCL8P10145 99 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 MARCKSP29966 332 aaPredicted RBP20.56■□□□□ 0.88
SF3A1-205ENST00000463818 LIG4P49917 911 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 ARPP19P56211 112 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 MRPL58Q14197 206 aaKnown RBP20.56■□□□□ 0.88
SF3A1-205ENST00000463818 PTPAQ15257 358 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 SPECC1Q5M775 1068 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 SLC8B1Q6J4K2 584 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 USP49Q70CQ1 688 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 ZNF461Q8TAF7 563 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 ITFG1Q8TB96 612 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 LARP4BQ92615 738 aaKnown RBP20.56■□□□□ 0.88
SF3A1-205ENST00000463818 EPSTI1Q96J88 318 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 SUSD3Q96L08 255 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 FAM86C1Q9NVL1 165 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 HCFC1R1Q9NWW0 138 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 DNMT3BQ9UBC3 853 aaKnown RBP20.56■□□□□ 0.88
SF3A1-205ENST00000463818 TUBGCP4Q9UGJ1 667 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 WDFY4Q6ZS81 3184 aa20.56■□□□□ 0.88
SF3A1-205ENST00000463818 TTC26A0AVF1 554 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 K7ENM7 598 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 ABLIM3O94929 683 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 SRFP11831 508 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 SYT1P21579 422 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 SCP2P22307 547 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 ELF1P32519 619 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 MCM4P33991 863 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 TNFSF9P41273 254 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 ROR1Q01973 937 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 HTR4Q13639 388 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 KYAT1Q16773 422 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 CWF19L1Q69YN2 538 aaKnown RBP20.55■□□□□ 0.88
SF3A1-205ENST00000463818 TMEM130Q8N3G9 435 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 FGF13Q92913 245 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 KIF12Q96FN5 646 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 FBXL5Q9UKA1 691 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 NUMBLQ9Y6R0 609 aa20.55■□□□□ 0.88
SF3A1-205ENST00000463818 MTCL1Q9Y4B5 1905 aaKnown RBP20.55■□□□□ 0.88
SF3A1-205ENST00000463818 KRBA1A5PL33 1030 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 LACTBL1A8MY62 500 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 STK25O00506 426 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 HNRNPDLO14979 420 aaKnown RBP20.54■□□□□ 0.88
SF3A1-205ENST00000463818 PIGRP01833 764 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 NMT1P30419 496 aaKnown RBP20.54■□□□□ 0.88
SF3A1-205ENST00000463818 RESTQ13127 1097 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 ZBTB6Q15916 424 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 CTXN3Q4LDR2 81 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 ZBTB41Q5SVQ8 909 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 FAM173BQ6P4H8 233 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 PARM1Q6UWI2 310 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 APPL2Q8NEU8 664 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 FIZ1Q96SL8 496 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 RPP25Q9BUL9 199 aaKnown RBP20.54■□□□□ 0.88
SF3A1-205ENST00000463818 BACH2Q9BYV9 841 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 CA14Q9ULX7 337 aa20.54■□□□□ 0.88
SF3A1-205ENST00000463818 WDR27A2RRH5 827 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 OGTO15294 1046 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 TBCAO75347 108 aaKnown RBP20.53■□□□□ 0.88
SF3A1-205ENST00000463818 AOC1P19801 751 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 CYP3A5P20815 502 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 LRPAP1P30533 357 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 GTF2BQ00403 316 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 CEBPZQ03701 1054 aaKnown RBP20.53■□□□□ 0.88
SF3A1-205ENST00000463818 ENOX2Q16206 610 aaKnown RBP20.53■□□□□ 0.88
SF3A1-205ENST00000463818 PABPC1LQ4VXU2 614 aaKnown RBP20.53■□□□□ 0.88
SF3A1-205ENST00000463818 GPR152Q8TDT2 470 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 DDX12PQ92771 950 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 FGF14Q92915 247 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 CLIC6Q96NY7 704 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 RTP3Q9BQQ7 232 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 RPF1Q9H9Y2 349 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms