RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 SRGAP1Q7Z6B7 1085 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 KCTD17Q8N5Z5 321 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 ZNF579Q8NAF0 562 aaKnown RBP12.29□□□□□ -0.44
SSR3-202ENST00000463503 CNNM3Q8NE01 707 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 ING5Q8WYH8 240 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 DDX1Q92499 740 aaKnown RBP12.29□□□□□ -0.44
SSR3-202ENST00000463503 RABGGTAQ92696 567 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 DNASE1L2Q92874 299 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 AK8Q96MA6 479 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 PAAF1Q9BRP4 392 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 IER2Q9BTL4 223 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 NXF3Q9H4D5 531 aaKnown RBP12.29□□□□□ -0.44
SSR3-202ENST00000463503 TTC12Q9H892 705 aaPredicted RBP12.29□□□□□ -0.44
SSR3-202ENST00000463503 TFIP11Q9UBB9 837 aaKnown RBP12.29□□□□□ -0.44
SSR3-202ENST00000463503 CELSR3Q9NYQ7 3312 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 ZMYM2Q9UBW7 1377 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 MYH11P35749 1972 aa12.29□□□□□ -0.44
SSR3-202ENST00000463503 ATG2BQ96BY7 2078 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 ASH1LQ9NR48 2969 aaKnown RBP12.28□□□□□ -0.44
SSR3-202ENST00000463503 NRG2O14511 850 aaPredicted RBP12.28□□□□□ -0.44
SSR3-202ENST00000463503 HRO43593 1189 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 TSPAN1O60635 241 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 MUTP22033 750 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 LIMK1P53667 647 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 SATB1Q01826 763 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 SRSF5Q13243 272 aaKnown RBP12.28□□□□□ -0.44
SSR3-202ENST00000463503 GAS6Q14393 721 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 STK38Q15208 465 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 PPM1LQ5SGD2 360 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 LNX1Q8TBB1 728 aaPredicted RBP12.28□□□□□ -0.44
SSR3-202ENST00000463503 SLC7A14Q8TBB6 771 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 LEO1Q8WVC0 666 aaPredicted RBP12.28□□□□□ -0.44
SSR3-202ENST00000463503 PIK3R5Q8WYR1 880 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 COLEC11Q9BWP8 271 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 DNMT3BQ9UBC3 853 aaKnown RBP12.28□□□□□ -0.44
SSR3-202ENST00000463503 FBXO2Q9UK22 296 aaPredicted RBP12.28□□□□□ -0.44
SSR3-202ENST00000463503 KCNH3Q9ULD8 1083 aa12.28□□□□□ -0.44
SSR3-202ENST00000463503 NDRG2Q9UN36 371 aaKnown RBP12.28□□□□□ -0.44
SSR3-202ENST00000463503 MRPS17Q9Y2R5 130 aaKnown RBP12.28□□□□□ -0.44
SSR3-202ENST00000463503 SF3B1O75533 1304 aaKnown RBP eCLIP12.28□□□□□ -0.44
SSR3-202ENST00000463503 DENND4CQ5VZ89 1909 aa12.27□□□□□ -0.44
SSR3-202ENST00000463503 MARCH6O60337 910 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 CUTAO60888 179 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 XYLBO75191 536 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 TXKP42681 527 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 CCR3P51677 355 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 LAMTOR4Q0VGL1 99 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 GRIK3Q13003 919 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 EPHA7Q15375 998 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 PSMD5Q16401 504 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 IL17AQ16552 155 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 PABPC1LQ4VXU2 614 aaKnown RBP12.27□□□□□ -0.45
SSR3-202ENST00000463503 TANGO2Q6ICL3 276 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 MIER3Q7Z3K6 550 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.27□□□□□ -0.45
SSR3-202ENST00000463503 KRI1Q8N9T8 703 aaKnown RBP12.27□□□□□ -0.45
SSR3-202ENST00000463503 PRPF31Q8WWY3 499 aaKnown RBP12.27□□□□□ -0.45
SSR3-202ENST00000463503 SPATA32Q96LK8 384 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 DHX33Q9H6R0 707 aaKnown RBP12.27□□□□□ -0.45
SSR3-202ENST00000463503 RXFP3Q9NSD7 469 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 WRAP73Q9P2S5 460 aaPredicted RBP12.27□□□□□ -0.45
SSR3-202ENST00000463503 POLIQ9UNA4 740 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 CITO14578 2027 aa12.27□□□□□ -0.45
SSR3-202ENST00000463503 C1QTNF9BB2RNN3 333 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 NR1I2O75469 434 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 KIF4AO95239 1232 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 C1QTNF9P0C862 333 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 SRGAP2CP0DJJ0 459 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 CEBPBP17676 345 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 NPEPPSP55786 919 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 SIM2Q14190 667 aaPredicted RBP12.26□□□□□ -0.45
SSR3-202ENST00000463503 HSP90AA2PQ14568 343 aaPredicted RBP12.26□□□□□ -0.45
SSR3-202ENST00000463503 AMHR2Q16671 573 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 HYIQ5T013 277 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 AXDND1Q5T1B0 1012 aaPredicted RBP12.26□□□□□ -0.45
SSR3-202ENST00000463503 ADALQ6DHV7 355 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 NOTUMQ6P988 496 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 HASPINQ8TF76 798 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 PSPC1Q8WXF1 523 aaKnown RBP12.26□□□□□ -0.45
SSR3-202ENST00000463503 TMEM143Q96AN5 459 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 ELSPBP1Q96BH3 223 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 CCDC51Q96ER9 411 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 CPB2Q96IY4 423 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 JPH2Q9BR39 696 aaPredicted RBP12.26□□□□□ -0.45
SSR3-202ENST00000463503 POLR3CQ9BUI4 534 aaPredicted RBP12.26□□□□□ -0.45
SSR3-202ENST00000463503 TMEM121BQ9BXQ6 578 aaPredicted RBP12.26□□□□□ -0.45
SSR3-202ENST00000463503 CCSER1Q9C0I3 900 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 GDE1Q9NZC3 331 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 ZMIZ1Q9ULJ6 1067 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 GIT1Q9Y2X7 761 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 NCANO14594 1321 aa12.26□□□□□ -0.45
SSR3-202ENST00000463503 HELZ2Q9BYK8 2649 aaKnown RBP12.25□□□□□ -0.45
SSR3-202ENST00000463503 FAM237AA0A1B0GTK4 181 aa12.25□□□□□ -0.45
SSR3-202ENST00000463503 A0A1W2PQ27 194 aa12.25□□□□□ -0.45
SSR3-202ENST00000463503 A0A1W2PQ64 194 aa12.25□□□□□ -0.45
SSR3-202ENST00000463503 A0A1W2PQD8 194 aa12.25□□□□□ -0.45
SSR3-202ENST00000463503 VWA3AA6NCI4 1184 aa12.25□□□□□ -0.45
SSR3-202ENST00000463503 DDX11L8A8MPP1 907 aa12.25□□□□□ -0.45
SSR3-202ENST00000463503 CHURC1-FNTBB4DL54 471 aa12.25□□□□□ -0.45
SSR3-202ENST00000463503 K7ESF4 209 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms