RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 C22orf31O95567 290 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 SOX5P35711 763 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 IKBKEQ14164 716 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 ZC2HC1CQ53FD0 456 aaPredicted RBP10.67□□□□□ -0.7
PTPRD-207ENST00000463477 PLEKHG4Q58EX7 1191 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 FAM109BQ6ICB4 259 aaPredicted RBP10.67□□□□□ -0.7
PTPRD-207ENST00000463477 TRMT1LQ7Z2T5 733 aaKnown RBP10.67□□□□□ -0.7
PTPRD-207ENST00000463477 C4orf19Q8IY42 314 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 LRRC57Q8N9N7 239 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 DBF4BQ8NFT6 615 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 SLC30A5Q8TAD4 765 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.67□□□□□ -0.7
PTPRD-207ENST00000463477 CAVIN3Q969G5 261 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 HVCN1Q96D96 273 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 ZBTB10Q96DT7 871 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 DRC1Q96MC2 740 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 SYT11Q9BT88 431 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 LRRC1Q9BTT6 524 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 TMEM59LQ9UK28 342 aa10.67□□□□□ -0.7
PTPRD-207ENST00000463477 NCANO14594 1321 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 F8VZ95 297 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 ZBTB39O15060 712 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 NCK2O43639 380 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 CTSHP09668 335 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 H2AFZP0C0S5 128 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 PLS3P13797 630 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 TMOD1P28289 359 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 RARRES1P49788 294 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 NAP1L1P55209 391 aaKnown RBP10.66□□□□□ -0.7
PTPRD-207ENST00000463477 MRPS6P82932 125 aaKnown RBP10.66□□□□□ -0.7
PTPRD-207ENST00000463477 BFSP1Q12934 665 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 C8orf74Q6P047 294 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 FAM43BQ6ZT52 329 aaPredicted RBP10.66□□□□□ -0.7
PTPRD-207ENST00000463477 H2AFVQ71UI9 128 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 INTS8Q75QN2 995 aaKnown RBP10.66□□□□□ -0.7
PTPRD-207ENST00000463477 ANO5Q75V66 913 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 SYCE1Q8N0S2 351 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 USP38Q8NB14 1042 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 BANK1Q8NDB2 785 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 ACTRT1Q8TDG2 376 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 SEPT8Q92599 483 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 CEP89Q96ST8 783 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 SELENOOQ9BVL4 669 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 CELF4Q9BZC1 486 aaKnown RBP10.66□□□□□ -0.7
PTPRD-207ENST00000463477 OSBPL7Q9BZF2 842 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 FAM49AQ9H0Q0 323 aaPredicted RBP10.66□□□□□ -0.7
PTPRD-207ENST00000463477 ANKEF1Q9NU02 776 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 CDY2AQ9Y6F7 541 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 SCN5AQ14524 2016 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 IGKV6-21A0A0C4DH24 114 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 ZBBXA8MT70 800 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 KIF4AO95239 1232 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 GTF2BQ00403 316 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 ARID5AQ03989 594 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 ENPEPQ07075 957 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 MKRN4PQ13434 485 aaPredicted RBP10.66□□□□□ -0.7
PTPRD-207ENST00000463477 RPS6KA1Q15418 735 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 FBXO47Q5MNV8 452 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 EFCAB12Q6NXP0 572 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 EXOC8Q8IYI6 725 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 LINC01465Q8N7H1 131 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 OLIG1Q8TAK6 271 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 TAF4BQ92750 862 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 APBB2Q92870 758 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 ACCSQ96QU6 501 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 PACSIN1Q9BY11 444 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 GDF3Q9NR23 364 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 SUCLA2Q9P2R7 463 aaPredicted RBP10.66□□□□□ -0.7
PTPRD-207ENST00000463477 APEX2Q9UBZ4 518 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 DMGDHQ9UI17 866 aaKnown RBP10.66□□□□□ -0.7
PTPRD-207ENST00000463477 AJAP1Q9UKB5 411 aaPredicted RBP10.66□□□□□ -0.7
PTPRD-207ENST00000463477 PPME1Q9Y570 386 aa10.66□□□□□ -0.7
PTPRD-207ENST00000463477 SIP14410 1827 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 TMEM265A0A087WTH1 108 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 GRXCR1A8MXD5 290 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 K7ENM7 598 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 M0QZ92 97 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 DDX3XO00571 662 aaKnown RBP eCLIP10.65□□□□□ -0.7
PTPRD-207ENST00000463477 SYF2O95926 243 aaKnown RBP10.65□□□□□ -0.7
PTPRD-207ENST00000463477 TMEM253P0C7T8 217 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 MYBL2P10244 700 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 KRT13P13646 458 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 ATP2A2P16615 1042 aaKnown RBP10.65□□□□□ -0.7
PTPRD-207ENST00000463477 HADHBP55084 474 aaKnown RBP10.65□□□□□ -0.7
PTPRD-207ENST00000463477 NCKAP1LP55160 1127 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 TNNC1P63316 161 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 CDC42EP1Q00587 391 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 MYL7Q01449 175 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 LPIN1Q14693 890 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 TCEAL1Q15170 157 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 TCTN1Q2MV58 587 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 OTUD6AQ7L8S5 288 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 IFT20Q8IY31 132 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 SYCP3Q8IZU3 236 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 METTL13Q8N6R0 699 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 TPCN2Q8NHX9 752 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 LMO3Q8TAP4 145 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 SLC9A7Q96T83 725 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 INTS2Q9H0H0 1204 aaKnown RBP10.65□□□□□ -0.7
PTPRD-207ENST00000463477 CYP26B1Q9NR63 512 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms