RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 FAM212AQ96EL1 285 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 SAAL1Q96ER3 474 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 FAM213AQ9BRX8 229 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 PCIF1Q9H4Z3 704 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 ASB7Q9H672 318 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 EXOC1Q9NV70 894 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 UBQLN1Q9UMX0 589 aaKnown RBP17.23■□□□□ 0.35
ERCC3-206ENST00000462306 SSX2IPQ9Y2D8 614 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 HCFC2Q9Y5Z7 792 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 LDHAP00338 332 aaKnown RBP17.22■□□□□ 0.35
ERCC3-206ENST00000462306 LRPAP1P30533 357 aa17.22■□□□□ 0.35
ERCC3-206ENST00000462306 BRCC3P46736 316 aa17.22■□□□□ 0.35
ERCC3-206ENST00000462306 FAM160A1Q05DH4 1040 aa17.22■□□□□ 0.35
ERCC3-206ENST00000462306 ELAVL2Q12926 359 aaKnown RBP17.22■□□□□ 0.35
ERCC3-206ENST00000462306 KIAA1841Q6NSI8 718 aa17.22■□□□□ 0.35
ERCC3-206ENST00000462306 LLGL2Q6P1M3 1020 aa17.22■□□□□ 0.35
ERCC3-206ENST00000462306 ARMCX5Q6P1M9 558 aa17.22■□□□□ 0.35
ERCC3-206ENST00000462306 NELFCDQ8IXH7 590 aa17.22■□□□□ 0.35
ERCC3-206ENST00000462306 TTPALQ9BTX7 342 aa17.22■□□□□ 0.35
ERCC3-206ENST00000462306 EMILIN2Q9BXX0 1053 aa17.22■□□□□ 0.35
ERCC3-206ENST00000462306 DERAQ9Y315 318 aa17.22■□□□□ 0.35
ERCC3-206ENST00000462306 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.22■□□□□ 0.35
ERCC3-206ENST00000462306 A0A0C4DFX4 3053 aa17.22■□□□□ 0.35
ERCC3-206ENST00000462306 ANK1P16157 1881 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 GOLGA8IPA6NC78 632 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 GRXCR2A6NFK2 248 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 GOLGA8JA6NMD2 632 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 KIAA0391O15091 583 aaKnown RBP17.21■□□□□ 0.35
ERCC3-206ENST00000462306 TEX28O15482 410 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 EXTL3O43909 919 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 RHOBTB3O94955 611 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 NFICP08651 508 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 FGFR3P22607 806 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 GUCY2FP51841 1108 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 WNT7BP56706 349 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 CLUL1Q15846 466 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 KNOP1Q1ED39 458 aaKnown RBP17.21■□□□□ 0.35
ERCC3-206ENST00000462306 SPATA1Q5VX52 437 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 PTCRAQ6ISU1 281 aaPredicted RBP17.21■□□□□ 0.35
ERCC3-206ENST00000462306 KANK3Q6NY19 840 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 BRSK2Q8IWQ3 736 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 TMEM87AQ8NBN3 555 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 RIN2Q8WYP3 895 aaPredicted RBP17.21■□□□□ 0.35
ERCC3-206ENST00000462306 PIK3R5Q8WYR1 880 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 AGPAT3Q9NRZ7 376 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 CD207Q9UJ71 328 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 C2CD2Q9Y426 696 aa17.21■□□□□ 0.35
ERCC3-206ENST00000462306 I3L4J1 428 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 XPOTO43592 962 aaKnown RBP17.2■□□□□ 0.34
ERCC3-206ENST00000462306 TRAPPC3O43617 180 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 GADD45BO75293 160 aaPredicted RBP17.2■□□□□ 0.34
ERCC3-206ENST00000462306 IL18RAPO95256 599 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 EPCAMP16422 314 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 KLRC2P26717 231 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 CLCN4P51793 760 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 SNRPFP62306 86 aaKnown RBP17.2■□□□□ 0.34
ERCC3-206ENST00000462306 TMEM132DQ14C87 1099 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 PUS10Q3MIT2 529 aaKnown RBP17.2■□□□□ 0.34
ERCC3-206ENST00000462306 ANKRD54Q6NXT1 300 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 PRSS55Q6UWB4 352 aaPredicted RBP17.2■□□□□ 0.34
ERCC3-206ENST00000462306 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.2■□□□□ 0.34
ERCC3-206ENST00000462306 PPFIBP1Q86W92 1011 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 CEP57Q86XR8 500 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 EFCAB13Q8IY85 973 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 GPD1LQ8N335 351 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 SMRP1Q8NCR6 262 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 LNX1Q8TBB1 728 aaPredicted RBP17.2■□□□□ 0.34
ERCC3-206ENST00000462306 CASP10Q92851 521 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.2■□□□□ 0.34
ERCC3-206ENST00000462306 HSPBP1Q9NZL4 362 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 FNIP2Q9P278 1114 aa17.2■□□□□ 0.34
ERCC3-206ENST00000462306 VWA8A3KMH1 1905 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 MBTPS2O43462 519 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 ADH1AP07327 375 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 SRGAP2BP0DMP2 458 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 IL9P15248 144 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 RPL17P18621 184 aaKnown RBP17.19■□□□□ 0.34
ERCC3-206ENST00000462306 SMAD4Q13485 552 aaKnown RBP17.19■□□□□ 0.34
ERCC3-206ENST00000462306 KCNB1Q14721 858 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 SYCE2Q6PIF2 218 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 BEST2Q8NFU1 509 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 ADAMTS19Q8TE59 1207 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 FBXL18Q96ME1 805 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 TIGD1Q96MW7 591 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 COL25A1Q9BXS0 654 aaPredicted RBP17.19■□□□□ 0.34
ERCC3-206ENST00000462306 S1PR5Q9H228 398 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 RBAKQ9NYW8 714 aaPredicted RBP17.19■□□□□ 0.34
ERCC3-206ENST00000462306 NUB1Q9Y5A7 615 aa17.19■□□□□ 0.34
ERCC3-206ENST00000462306 VCANP13611 3396 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 ANO9A1A5B4 782 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 PPEF2O14830 753 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 CLIC2O15247 247 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 HOXB8P17481 243 aaPredicted RBP17.18■□□□□ 0.34
ERCC3-206ENST00000462306 TKTP29401 623 aaKnown RBP17.18■□□□□ 0.34
ERCC3-206ENST00000462306 CREMQ03060 361 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 PNOCQ13519 176 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 PSMD5Q16401 504 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 HS2ST1Q7LGA3 356 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 NT5DC4Q86YG4 428 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 CBWD2Q8IUF1 395 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms